Dynamical properties of interfacial water and its role for biomolecular dynamics
Doctoral thesis, 2006
Water is the foundation of life, and without it life as we know it
would not exist. An organism consists to a large extent of water, and
apart from a few larger reservoirs, a large fraction of the water in a
body is closely associated with surfaces of biomolecules of different
kinds. This water is denoted biological water. The biological water is
known to affect the dynamics of biomaterials such as proteins, which in
turn is necessary for their functions. However, how and why the
surrounding environment affects the dynamics of proteins and other
biomolecules is still not fully understood. Therefore, it is of
importance to investigate not only the dynamics of the biomolecules but
also the dynamics of their surrounding solvent and how they are
related. We have investigated systems with water associated to surfaces
of different kinds, both a model system and in various biological
systems. In addition, measurements on proteins in solvents of different
viscosities and dynamical properties have been performed in order to
investigate the coupling between protein and solvent dynamics, for a
better understanding of the role of water in biological systems. From
the results we can conclude that the dynamics of confined water in
various systems change its character from a low temperature Arrhenius
behaviour to high temperature non-Arrhenius behaviour at a certain
temperature, which suggests that only local motions are present in
confined water at low temperatures, whereas the dynamics is of more
global character at higher temperatures. The results furthermore
indicates that the most local protein motions are determined by the
local motions in the surrounding solvent, whereas more large scale
protein motions are driven by cooperative motions in the solvent. Thus,
a similar temperature behaviour is observed for both the solvent and
the protein dynamics. This implies that our findings seem to support
the recently suggested solvent-slaving idea, which suggests that local
and more global protein motions are slaved by the local -relaxations
and the more large-scale cooperative -relaxation in the surrounding
solvent, respectively.