Fredrik Boulund
Showing 17 publications
2018
Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics
Roger Karlsson, Lucia Gonzales-Siles, Margarita Gomila et al
PLoS ONE. Vol. 13 (12)
Journal article
2017
Typing and Characterization of Bacteria Using Bottom-up Tandem Mass Spectrometry Proteomics
Fredrik Boulund, R. Karlsson, L. Gonzales-Siles et al
Molecular and Cellular Proteomics. Vol. 16 (6), p. 1052-1063
Journal article
2017
Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets
Fredrik Boulund, Fanny Berglund, Carl-Fredrik Flach et al
BMC Genomics. Vol. 18 (1), p. Art 682-
Journal article
2016
Proteotyping of Streptococcus pneumoniae, using tandem mass spectrometry for identification of biomarkers for species and strain differentiation
Hedvig E Jakobsson, Lucia Gonzales-Siles, Roger Karlsson et al
11th International Meeting on Microbial Epidemiological Markers (IMMEM XI) 9 - 12 March 2016, Estoril, Portugal
Conference contribution
2016
Strategies to improve usability and preserve accuracy in biological sequence databases
Johan Bengtsson-Palme, Fredrik Boulund, Robert Edström et al
Proteomics. Vol. 16 (18), p. 2454-2460
Journal article
2016
Draft genome sequence of extended-spectrum-β-lactamase-producing Escherichia coli strain CCUG 62462, isolated from a urine sample
Anna Johnning, Hedvig E Jakobsson, Fredrik Boulund et al
Genome Announcements. Vol. 4 (6), p. e01382-16
Journal article
2015
In vitro assessment of platelet concentrates with multiple electrode aggregometry.
Caroline Andersson Shams Hakimi, Camilla Hesse, Håkan Wallén et al
Platelets. Vol. 26 (2), p. 132-137
Journal article
2015
Tentacle: distributed quantification of genes in metagenomes
Fredrik Boulund, Anders Sjögren, Erik Kristiansson
GigaScience. Vol. 4 (1), p. artikel nr 40-
Journal article
2014
Shotgun metagenomics reveals a wide array of antibiotic resistance genes and mobile elements in a polluted lake in India
Johan Bengtsson-Palme, Fredrik Boulund, Jerker Fick et al
Frontiers in Microbiology. Vol. 5 (648)
Journal article
2013
Functional verification of computationally predicted qnr genes
Carl-Fredrik Flach, Fredrik Boulund, Erik Kristiansson et al
Annals of Clinical Microbiology and Antimicrobials. Vol. 12 (1), p. artikel nr 34-
Journal article
2012
Comprehensive Analysis of Antibiotic Resistance Genes Using Metagenomic DNA Sequencing: Studies of Contaminated River Sediment, Well Water and Soil Microbial Communities
Johan Bengtsson, Fredrik Boulund, Jerker Fick et al
ISME14 Conference, Copenhagen, Denmark, 2012-08-20
Conference poster
2012
Comprehensive Analysis of Antibiotic Resistance Genes Using Metagenomic DNA Sequencing: Studies of Contaminated River Sediment, Well Water and Soil Microbial Communities
Johan Bengtsson, Fredrik Boulund, Jerker Fick et al
SocBiN Bioinformatics Conference 2012, Stockholm, Sweden, 2012-06-11
Conference poster
2012
A novel method to discover fluoroquinolone antibiotic resistance (qnr) genes in fragmented nucleotide sequences
Fredrik Boulund, Anna Johnning, Mariana Buongermino Pereira et al
BMC Genomics. Vol. 13 (1), p. 695-
Journal article
2011
Exploring the metagenomes of environmental antibiotic hotspots to identify resistance factors that we may face in the clinic tomorrow
D. G. Joakim Larsson, Anders Janzon, Anna Johnning et al
SETAC Europe 21st Annual Meeting; Ecosystem Protection in a Sustainable World: A challenge for Science and Regulation 15-19 May 2011, p. 38-
Conference poster
2009
An analytical solution for finding voids and bottlenecks within macromolecules
Fredrik Boulund, Viktor Jonsson, Erik Sterner et al
3DSig 2009: The 5th Structural Bioinformatics and Computational Biophysics Meeting, Stockholm, Sweden, 27-28 June 2009, p. 77-78
Conference poster
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