Fredrik Boulund

Showing 17 publications

2017

Typing and Characterization of Bacteria Using Bottom-up Tandem Mass Spectrometry Proteomics

Fredrik Boulund, R. Karlsson, L. Gonzales-Siles et al
Molecular and Cellular Proteomics. Vol. 16 (6), p. 1052-1063
Journal article
2017

Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets

Fredrik Boulund, Fanny Berglund, Carl-Fredrik Flach et al
BMC Genomics. Vol. 18 (1), p. Art 682-
Journal article
2016

Proteotyping of Streptococcus pneumoniae, using tandem mass spectrometry for identification of biomarkers for species and strain differentiation

Hedvig E Jakobsson, Lucia Gonzales-Siles, Roger Karlsson et al
11th International Meeting on Microbial Epidemiological Markers (IMMEM XI) 9 - 12 March 2016, Estoril, Portugal
Conference contribution
2016

Strategies to improve usability and preserve accuracy in biological sequence databases

Johan Bengtsson-Palme, Fredrik Boulund, Robert Edström et al
Proteomics. Vol. 16 (18), p. 2454-2460
Journal article
2016

Draft genome sequence of extended-spectrum-β-lactamase-producing Escherichia coli strain CCUG 62462, isolated from a urine sample

Anna Johnning, Hedvig E Jakobsson, Fredrik Boulund et al
Genome Announcements. Vol. 4 (6), p. e01382-16
Journal article
2015

In vitro assessment of platelet concentrates with multiple electrode aggregometry.

Caroline Andersson Shams Hakimi, Camilla Hesse, Håkan Wallén et al
Platelets. Vol. 26 (2), p. 132-137
Journal article
2015

Tentacle: distributed quantification of genes in metagenomes

Fredrik Boulund, Anders Sjögren, Erik Kristiansson
GigaScience. Vol. 4 (1), p. artikel nr 40-
Journal article
2014

Shotgun metagenomics reveals a wide array of antibiotic resistance genes and mobile elements in a polluted lake in India

Johan Bengtsson-Palme, Fredrik Boulund, Jerker Fick et al
Frontiers in Microbiology. Vol. 5 (648)
Journal article
2013

Analysis of large-scale metagenomic data

Fredrik Boulund
Licentiate thesis
2013

Functional verification of computationally predicted qnr genes

Carl-Fredrik Flach, Fredrik Boulund, Erik Kristiansson et al
Annals of Clinical Microbiology and Antimicrobials. Vol. 12 (1), p. artikel nr 34-
Journal article
2012

Comprehensive Analysis of Antibiotic Resistance Genes Using Metagenomic DNA Sequencing: Studies of Contaminated River Sediment, Well Water and Soil Microbial Communities

Johan Bengtsson, Fredrik Boulund, Jerker Fick et al
ISME14 Conference, Copenhagen, Denmark, 2012-08-20
Conference poster
2012

Comprehensive Analysis of Antibiotic Resistance Genes Using Metagenomic DNA Sequencing: Studies of Contaminated River Sediment, Well Water and Soil Microbial Communities

Johan Bengtsson, Fredrik Boulund, Jerker Fick et al
SocBiN Bioinformatics Conference 2012, Stockholm, Sweden, 2012-06-11
Conference poster
2012

A novel method to discover fluoroquinolone antibiotic resistance (qnr) genes in fragmented nucleotide sequences

Fredrik Boulund, Anna Johnning, Mariana Buongermino Pereira et al
BMC Genomics. Vol. 13 (1), p. 695-
Journal article
2011

Exploring the metagenomes of environmental antibiotic hotspots to identify resistance factors that we may face in the clinic tomorrow

D. G. Joakim Larsson, Anders Janzon, Anna Johnning et al
SETAC Europe 21st Annual Meeting; Ecosystem Protection in a Sustainable World: A challenge for Science and Regulation 15-19 May 2011, p. 38-
Conference poster
2009

An analytical solution for finding voids and bottlenecks within macromolecules

Fredrik Boulund, Viktor Jonsson, Erik Sterner et al
3DSig 2009: The 5th Structural Bioinformatics and Computational Biophysics Meeting, Stockholm, Sweden, 27-28 June 2009, p. 77-78
Conference poster

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