Mariana Buongermino Pereira

Showing 11 publications


A comprehensive survey of integron-associated genes present in metagenomes

Mariana Buongermino Pereira, Tobias Österlund, Martin Eriksson et al
BMC Genomics. Vol. 21 (1)
Journal article

Accurate and Sensitive Analysis of Minimal Residual Disease in Acute Myeloid Leukemia Using Deep Sequencing of Single Nucleotide Variations

Erik Delsing Malmberg, Anna Rehammar, Mariana Buongermino Pereira et al
Journal of Molecular Diagnostics. Vol. 21 (1), p. 149-162
Journal article

The resistomes of six carbapenem-resistant pathogens - a critical genotype-phenotype analysis

Anna Johnning, N. Karami, Erika Tång Hallbäck et al
Microbial Genomics. Vol. 4 (11)
Journal article

Computational and Statistical Considerations in the Analysis of Metagenomic Data

Fredrik Boulund, Mariana Buongermino Pereira, Viktor Jonsson et al
Metagenomics: Perspectives, Methods, and Applications, p. 81-102
Book chapter

Comparison of normalization methods for the analysis of metagenomic gene abundance data

Mariana Buongermino Pereira, Mikael Wallroth, Viktor Jonsson et al
BMC Genomics. Vol. 19 (1)
Journal article

Strategies to improve usability and preserve accuracy in biological sequence databases

Johan Bengtsson-Palme, Fredrik Boulund, Robert Edström et al
Proteomics. Vol. 16 (18), p. 2454-2460
Journal article

HattCI: Fast and Accurate attC site Identification Using Hidden Markov Models.

Mariana Buongermino Pereira, Mikael Wallroth, Erik Kristiansson et al
Journal of Computational Biology. Vol. 23 (11), p. 891-902
Journal article

Differences in the Binding Affinities of ErbB Family: Heterogeneity in the Prediction of Resistance Mutants

Mariana Buongermino Pereira, Chandra S Verma, Gloria Fuentes
PLoS ONE. Vol. 8 (10), p. e77054-
Journal article

A novel method to discover fluoroquinolone antibiotic resistance (qnr) genes in fragmented nucleotide sequences

Fredrik Boulund, Anna Johnning, Mariana Buongermino Pereira et al
BMC Genomics. Vol. 13 (1), p. 695-
Journal article

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