Rocio Mercado

Assistant Professor at Data Science and AI

Source: chalmers.se
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Showing 8 publications

2024

Do Chemformers Dream of Organic Matter? Evaluating a Transformer Model for Multistep Retrosynthesis

Annie M. Westerlund, Siva Manohar Koki, Supriya Kancharla et al
Journal of Chemical Information and Modeling. Vol. 64 (8), p. 3021-3033
Journal article
2024

Modeling PROTAC degradation activity with machine learning

Stefano Ribes, Eva Nittinger, Christian Tyrchan et al
Artificial Intelligence in the Life Sciences. Vol. 6
Journal article
2024

A comprehensive review of emerging approaches in machine learning for de novo PROTAC design

Yossra Gharbi, Rocio Mercado
Digital Discovery. Vol. In Press
Review article
2023

Data Sharing in Chemistry: Lessons Learned and a Case for Mandating Structured Reaction Data

Rocio Mercado, Steven M. Kearnes, Connor W. Coley
Journal of Chemical Information and Modeling. Vol. 63 (14), p. 4253-4265
Review article
2022

De Novo Drug Design Using Reinforcement Learning with Graph- Based Deep Generative Models

Sara Romeo Atance, Juan Viguera Diez, Ola Engkvist et al
Journal of Chemical Information and Modeling. Vol. 62 (20), p. 4863-4872
Journal article
2022

Exploring Graph Traversal Algorithms in Graph-Based Molecular Generation

Rocio Mercado, Esben Jannik Bjerrum, Ola Engkvist
Journal of Chemical Information and Modeling. Vol. 62 (9), p. 2093-2100
Journal article
2021

Graph networks for molecular design

Rocio Mercado, Tobias Rastemo, Edvard Lindelöf et al
Machine Learning: Science and Technology. Vol. 2 (2)
Journal article
2020

Practical notes on building molecular graph generative models

Rocio Mercado, Tobias Rastemo, Edvard Lindelof et al
Applied AI Letters. Vol. 1 (2)
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Showing 2 research projects

2024–2027

Modeling cellular uptake via the IFITM pathway for data-driven drug design

Rocio Mercado Data Science and AI
Swedish Research Council (VR)

2024–2026

An integrated molecular dynamics and deep learning framework for multi-modal materials data

Rocio Mercado Data Science and AI
Merck KGaA
Intel Corporation

There might be more projects where Rocio Mercado participates, but you have to be logged in as a Chalmers employee to see them.