Kaisa Thorell

Publications (16)
Projects (0)

Showing 16 publications

2023

Circulation of enterotoxigenic Escherichia coli (ETEC) isolates expressing CS23 from the environment to clinical settings

Carla Calderon Toledo, Astrid von Mentzer, Jorge Agramont et al

mSystems. Vol. 8 (5)

Journal article

Show project

2018

Metaxa2 Database Builder: enabling taxonomic identification from metagenomic or metabarcoding data using any genetic marker

Johan Bengtsson-Palme, Rodney T. Richardson, Marco Meola et al

Bioinformatics. Vol. 34 (23), p. 4027-4033

Journal article

2017

Draft Genome Sequences of Six Strains of Streptococcus pneumoniae from Serotypes 5, 6A, 6B, 18C, 19A, and 23F

Hedvig E. Jakobsson, Francisco Salvà-Serra, Kaisa Thorell et al

Genome Announcements. Vol. 5 (14)

Journal article

2017

In vivo analysis of the viable microbiota and Helicobacter pylori transcriptome in gastric infection and early stages of carcinogenesis

Kaisa Thorell, Johan Bengtsson-Palme, Oscar Hsin Fu Liu et al

Infection and Immunity. Vol. 85 (10)

Journal article

2016

Draft Genome Sequence of Streptococcus gordonii Type Strain CCUG 33482T.

Francisco Salvà-Serra, Hedvig E Jakobsson, Kaisa Thorell et al

Genome Announcements. Vol. 4 (2)

Journal article

2016

Comparative Analysis of Two Helicobacter pylori Strains using Genomics and Mass Spectrometry-Based Proteomics

R. Karlsson, Kaisa Thorell, Seyedeh Shaghayegh Hosseini et al

Frontiers in Microbiology. Vol. 7 (NOV), p. art. no. 1757 -

Journal article

2016

Strategies to improve usability and preserve accuracy in biological sequence databases

Johan Bengtsson-Palme, Fredrik Boulund, Robert Edström et al

Proteomics. Vol. 16 (18), p. 2454-2460

Journal article

2016

Identification of a Latin American-specific BabA adhesin variant through whole genome sequencing of Helicobacter pylori patient isolates from Nicaragua

Kaisa Thorell, Seyed Vali Hesseini, Rvpp Gonzales et al

BMC Evolutionary Biology. Vol. 16 (1), p. art no 53-

Journal article

2016

Draft Genome Sequence of Moraxella catarrhalis Type Strain CCUG 353T.

Hedvig E Jakobsson, Francisco Salvà-Serra, Kaisa Thorell et al

Genome Announcements. Vol. 4 (3)

Journal article

2016

Metaxa2 Diversity Tools: Easing microbial community analysis with Metaxa2

Johan Bengtsson-Palme, Kaisa Thorell, Christian Wurzbacher et al

Ecological Informatics. Vol. 33, p. 45-50

Journal article

2015

Metaxa2: Improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data

Johan Bengtsson-Palme, Martin Hartmann, Martin Eriksson et al

Molecular Ecology Resources. Vol. 15 (6), p. 1403-1414

Journal article

2014

Multi-level characterization of host and pathogen in Helicobacter pylori-associated gastric carcinogenesis

Kaisa Thorell

Doctoral thesis

2013

Transcriptome signatures in Helicobacter pylori-infected mucosa identifies acidic mammalian chitinase loss as a corpus atrophy marker

Intawat Nookaew, Kaisa Thorell, Kuntal Worah et al

BMC Medical Genomics. Vol. 6 (41)

Journal article

2013

Evolution of the human gastrokine locus and confounding factors regarding the pseudogenicity of GKN3

J. H. Geahlen, C. Lapid, Kaisa Thorell et al

Physiological Genomics. Vol. 45 (15), p. 667-683

Journal article

2012

Bicarbonate and functional CFTR channel are required for proper mucin secretion and link cystic fibrosis with its mucus phenotype.

Jenny K Gustafsson, Anna Ermund, Daniel Ambort et al

The Journal of experimental medicine. Vol. 209 (7), p. 1263-72

Journal article

2009

Verification of genes differentially expressed in neuroblastoma tumours: a study of potential tumour suppressor genes.

Kaisa Thorell, Annika Bergman, Helena Carén et al

BMC Medical Genomics. Vol. 2 (1), p. 53-

Journal article

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