Kaisa Thorell

Visar 15 publikationer

2018

Metaxa2 Database Builder: enabling taxonomic identification from metagenomic or metabarcoding data using any genetic marker

Johan Bengtsson-Palme, Rodney T. Richardson, Marco Meola et al
Bioinformatics. Vol. 34 (23), p. 4027-4033
Artikel i vetenskaplig tidskrift
2017

Draft Genome Sequences of Six Strains of Streptococcus pneumoniae from Serotypes 5, 6A, 6B, 18C, 19A, and 23F

Hedvig E. Jakobsson, Francisco Salvà-Serra, Kaisa Thorell et al
Genome Announcements. Vol. 5 (14)
Artikel i vetenskaplig tidskrift
2017

In vivo analysis of the viable microbiota and Helicobacter pylori transcriptome in gastric infection and early stages of carcinogenesis

Kaisa Thorell, Johan Bengtsson-Palme, Oscar Hsin Fu Liu et al
Infection and Immunity. Vol. 85 (10)
Artikel i vetenskaplig tidskrift
2016

Draft Genome Sequence of Moraxella catarrhalis Type Strain CCUG 353T.

Hedvig E Jakobsson, Francisco Salvà-Serra, Kaisa Thorell et al
Genome announcements. Vol. 4 (3)
Artikel i vetenskaplig tidskrift
2016

Metaxa2 Diversity Tools: Easing microbial community analysis with Metaxa2

Johan Bengtsson-Palme, Kaisa Thorell, Christian Wurzbacher et al
Ecological Informatics. Vol. 33, p. 45-50
Artikel i vetenskaplig tidskrift
2016

Strategies to improve usability and preserve accuracy in biological sequence databases

Johan Bengtsson-Palme, Fredrik Boulund, Robert Edström et al
Proteomics. Vol. 16 (18), p. 2454-2460
Artikel i vetenskaplig tidskrift
2016

Comparative Analysis of Two Helicobacter pylori Strains using Genomics and Mass Spectrometry-Based Proteomics

R. Karlsson, Kaisa Thorell, Seyedeh Shaghayegh Hosseini et al
Frontiers in Microbiology. Vol. 7 (NOV), p. art. no. 1757 -
Artikel i vetenskaplig tidskrift
2016

Identification of a Latin American-specific BabA adhesin variant through whole genome sequencing of Helicobacter pylori patient isolates from Nicaragua

Kaisa Thorell, Seyed Vali Hesseini, Rvpp Gonzales et al
BMC Evolutionary Biology. Vol. 16 (1), p. art no 53-
Artikel i vetenskaplig tidskrift
2016

Draft Genome Sequence of Streptococcus gordonii Type Strain CCUG 33482T.

Francisco Salvà-Serra, Hedvig E Jakobsson, Kaisa Thorell et al
Genome announcements. Vol. 4 (2)
Artikel i vetenskaplig tidskrift
2015

Metaxa2: Improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data

Johan Bengtsson-Palme, Martin Hartmann, Martin Eriksson et al
Molecular Ecology Resources. Vol. 15 (6), p. 1403-1414
Artikel i vetenskaplig tidskrift
2013

Transcriptome signatures in Helicobacter pylori-infected mucosa identifies acidic mammalian chitinase loss as a corpus atrophy marker

Intawat Nookaew, Kaisa Thorell, Kuntal Worah et al
BMC Medical Genomics. Vol. 6 (41)
Artikel i vetenskaplig tidskrift
2013

Evolution of the human gastrokine locus and confounding factors regarding the pseudogenicity of GKN3

J. H. Geahlen, C. Lapid, Kaisa Thorell et al
Physiological Genomics. Vol. 45 (15), p. 667-683
Artikel i vetenskaplig tidskrift
2012

Bicarbonate and functional CFTR channel are required for proper mucin secretion and link cystic fibrosis with its mucus phenotype.

Jenny K Gustafsson, Anna Ermund, Daniel Ambort et al
The Journal of experimental medicine. Vol. 209 (7), p. 1263-72
Artikel i vetenskaplig tidskrift
2009

Verification of genes differentially expressed in neuroblastoma tumours: a study of potential tumour suppressor genes.

Kaisa Thorell, Annika Bergman, Helena Carén et al
BMC Medical Genomics. Vol. 2 (1), p. 53-
Artikel i vetenskaplig tidskrift

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