Stationary mutation models
Journal article, 2016

Probability calculations for relationship inference based on DNA tests are often performed with computer packages such as Familias. When mutations are assumed to be a possibility, one may notice a curious and problematic effect of including untested parents: results tend to change slightly. In this paper, we trace this effect back to fundamental model-formulating issues which can only be resolved by using stationary mutation models. We present several methods for obtaining such stationary mutation matrices from original mutation matrices, and evaluate essential properties of these methods. Our conclusion is that typically, stationary mutation models can be obtained, but for many types of markers, it may be impossible to combine specific biologically reasonable requirements for a mutation matrix with the requirement of stationarity.

DNA relationship inference

Genetics & Heredity

Mutation matrices

STR markers

Legal Medicine

Familias

Author

Ivar Simonsson

University of Gothenburg

Chalmers, Mathematical Sciences, Mathematical Statistics

Petter Mostad

Chalmers, Mathematical Sciences, Mathematical Statistics

University of Gothenburg

Forensic Science International: Genetics

1872-4973 (ISSN)

Vol. 23 217-225

Subject Categories

Mathematics

DOI

10.1016/j.fsigen.2016.04.005

More information

Created

10/7/2017