The 2008 update of the Aspergillus nidulans genome annotation: A community effort
Artikel i vetenskaplig tidskrift, 2009

The identification and annotation of protein-coding genes is one of the primary goals of whole-genome sequencing projects, and the accuracy of predicting the primary protein products of gene expression is vital to the interpretation of the available data and the design of downstream functional applications. Nevertheless, the comprehensive annotation of eukaryotic genomes remains a considerable challenge. Many genomes submitted to public databases, including those of major model organisms, contain significant numbers of wrong and incomplete gene predictions. We present a community-based reannotation of the Aspergillus nidulans genome with the primary goal of increasing the number and quality of protein functional assignments through the careful review of experts in the field of fungal biology. (C) 2009 Elsevier Inc. All rights reserved.

Annotation

cell-wall

CADRE

a-fumigatus

identification

Transcription factors

transcriptional activator

dna

Fungal community

niger

Genome

sequence

prediction

Aspergilli

gene-cluster

Aspergillus nidulans

biosynthesis

Assembly

Författare

J. R. Wortman

J. M. Gilsenan

V. Joardar

J. Deegan

J. Clutterbuck

M. R. Andersen

D. Archer

M. Bencina

G. Braus

P. Coutinho

H. von Dohren

J. Doonan

A. J. M. Driessen

P. Durek

E. Espeso

E. Fekete

M. Flipphi

C. G. Estrada

S. Geysens

G. Goldman

P. W. J. de Groot

K. Hansen

S. D. Harris

T. Heinekamp

K. Helmstaedt

B. Henrissat

G. Hofmann

T. Homan

T. Horio

H. Horiuchi

S. James

M. Jones

L. Karaffa

Z. Karanyi

M. Kato

N. Keller

D. E. Kelly

Jakw Kiel

J. M. Kim

I. J. van der Klei

F. M. Klis

A. Kovalchuk

N. Krasevec

C. P. Kubicek

B. Liu

A. MacCabe

V. Meyer

P. Mirabito

M. Miskei

M. Mos

J. Mullins

D. R. Nelson

Jens B Nielsen

Chalmers, Kemi- och bioteknik, Livsvetenskaper, Systembiologi

B. R. Oakley

S. A. Osmani

T. Pakula

A. Paszewski

I. Paulsen

S. Pilsyk

I. Pocsi

P. J. Punt

A. F. J. Ram

Q. H. Ren

X. Robellet

G. Robson

B. Seiboth

P. van Solingen

T. Specht

J. B. Sun

N. Taheri-Talesh

N. Takeshita

D. Ussery

P. A. vanKuyk

H. Visser

Pjiv de Vondervoort

R. P. de Vries

J. Walton

X. Xiang

Y. Xiong

A. P. Zeng

B. W. Brandt

M. J. Cornell

Camjj van den Hondel

J. Visser

S. G. Oliver

G. Turner

Fungal Genetics and Biology

1087-1845 (ISSN) 1096-0937 (eISSN)

Vol. 46 S2-S13

Ämneskategorier

Dermatologi och venereologi

Styrkeområden

Livsvetenskaper och teknik

DOI

10.1016/j.fgb.2008.12.003

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2017-10-07