Microbially induced concrete degradation in subsea tunnels - Community structure of biofilms from sprayed reinforced concrete in the Oslofjord tunnel
In order to understand and ultimately prevent sprayed concrete deterioration and corrosion processes caused by microbial activity, different molecular methods and chemical measurements were preformed to assess the microbial diversity and community composition as well as the micro-environmental conditions within the biofilm. High throughput amplicon sequencing of 16S rRNA genes was used to survey the microbial composition, and microsensors were used to measure profiles of oxygen and pH within the biofilm. The combination of techniques was used to provide linkage between microbial diversity and chemical micro-environment within the biofilm. High abundance of iron-oxidising bacteria within genus Mariprofundus and autotrophic nitrogen converting microorganisms were detected in the biofilms from three different tunnel sites. Furthermore, a number of the numerically important contributors to the biofilm communities could not be assigned to any function. Microsensor measurements showed relatively stable pH around 7-8 towards the bottom of the biofilm up to the biofilm/electrode interface. The measured dissolved oxygen profiles revealed differences among local spots which varied in the superficial flow rate of water across the biofilm. With high superficial flow rate, dissolved oxygen concentrations decreased less with biofilm depth than at lower superficial flow rate. Furthermore, measurements alpha- and beta-diversity of the biofilm communities showed significant differences in richness and community structure between the tunnel sites. Pairwise microbial community comparisons at the three sites suggested that deterministic factors were important for the assembly of the microbial communities.
Apparently, the biofilm transformations were more complex than initially anticipated and a combination of advanced molecular approaches are needed to trace down the role of these bacteria for the degradation of sprayed concrete in subsea tunnels.
microbial community structure
16S rRNA gene sequences
Chalmers, Arkitektur och samhällsbyggnadsteknik, Vatten Miljö Teknik
Karačić, S., Wilén, B., Suarez C., Hagelia, P., Persson, F.: Subsea tunnel reinforced sprayed concrete subjected to deterioration harbours distinct microbial communities. (manuscript)
Karačić, S., Hagelia, P., Haverkamp, THA., Persson, F. and Wilén, B.: Biodeterioration of reinforced sprayed concrete in subsea tunnels. Will be presented at the International RILEM Conference on Microorganisms-Cementitious Materials Interactions. 25-26th of June 2018, Toulouse, France (peer-reviewed)
Microbial attack on subsea sprayed concrete
International RILEM Conference on Microorganisms-Cementitious Materials Interactions,; (2016)p. 63-75
Paper i proceeding
Chalmers tekniska högskola
Opponent: Alexandra Bertron, Professor at Department of Civil Engineering, Institut national des sciences appliquées de Toulouse - INSA, France, firstname.lastname@example.org