Rui Pereira

Showing 15 publications

2023

Flux regulation through glycolysis and respiration is balanced by inositol pyrophosphates in yeast

Ning Qin, Lingyun Li, Xu Ji et al
Cell. Vol. 186 (4), p. 748-763.e15
Journal article
2021

Metabolic network remodelling enhances yeast’s fitness on xylose using aerobic glycolysis

Xiaowei Li, Yanyan Wang, Gang Li et al
Nature Catalysis. Vol. 4 (9), p. 783-796
Journal article
2021

Metabolic Engineering of Yeast

Rui Pereira, Olena Ishchuk, Xiaowei Li et al
Metabolic Engineering: Concepts and Applications: Volume 13a and 13b. Vol. 13, p. 689-733
Book chapter
2020

Stress-induced expression is enriched for evolutionarily young genes in diverse budding yeasts

Tyler Doughty, Iván Domenzain Del Castillo Cerecer, Aaron Millan-Oropeza et al
Nature Communications. Vol. 11 (1)
Journal article
2020

Multidimensional engineering of Saccharomyces cerevisiae for efficient synthesis of medium-chain fatty acids

Zhu Zhiwei, Yating Hu, Paulo Teixeira et al
Nature Catalysis. Vol. 3 (1), p. 64-74
Journal article
2020

Nitrogen limitation reveals large reserves in metabolic and translational capacities of yeast

Tao Yu, Kate Campbell, Rui Pereira et al
Nature Communications. Vol. 11 (1)
Journal article
2020

Metabolic engineering strategies for butanol production in Escherichia coli

Sofia Ferreira, Rui Pereira, S. A. Wahl et al
Biotechnology and Bioengineering. Vol. 117 (8), p. 2571-2587
Review article
2020

Elucidating aromatic acid tolerance at low pH in Saccharomyces cerevisiae using adaptive laboratory evolution

Rui Pereira, Elsayed Mohamed, Mohammad Radi et al
Proceedings of the National Academy of Sciences of the United States of America. Vol. 117 (45), p. 27954-27961
Journal article
2020

Adaptive Laboratory Evolution of Ale and Lager Yeasts for Improved Brewing Efficiency and Beer Quality

B. Gibson, M. Dahabieh, K. Krogerus et al
Annual review of food science and technology. Vol. 11, p. 23-44
Review article
2019

Discovery and implementation of a novel pathway for n-butanol production via 2-oxoglutarate

Sofia Ferreira, Rui Pereira, Filipe Liu et al
Biotechnology for Biofuels. Vol. 12 (1)
Journal article
2019

Adaptive laboratory evolution of tolerance to dicarboxylic acids in Saccharomyces cerevisiae

Rui Pereira, Yongjun Wei, Elsayed Mohamed et al
Metabolic Engineering. Vol. 56, p. 130-141
Journal article
2018

Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D

Piroon Jenjaroenpun, Thidathip Wongsurawat, Rui Pereira et al
Nucleic Acids Research. Vol. 46 (7)
Journal article
2018

Reprogramming Yeast Metabolism from Alcoholic Fermentation to Lipogenesis

Tao Yu, Yongjin Zhou, Mingtao Huang et al
Cell. Vol. 174 (6), p. 1549-1572
Journal article
2016

Improving the flux distributions simulated with genome-scale metabolic models of Saccharomyces cerevisiae

Rui Pereira, Jens B Nielsen, I. Rocha
Metabolic Engineering Communications. Vol. 3, p. 153-163
Journal article
2015

Production of beta-ionone by combined expression of carotenogenic and plant CCD1 genes in Saccharomyces cerevisiae

J. Lopez, K. Essus, Il-Kwon Kim et al
Microbial Cell Factories. Vol. 14 (1), p. Art. no. 84-
Journal article

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