Exploring carbon source related localization and phosphorylation in the Snf1/Mig1 network using population and single cell-based approaches
Journal article, 2024

The AMPK/SNF1 pathway governs energy balance in eukaryotic cells, notably influencing glucose de-repression. In S. cerevisiae, Snf1 is phosphorylated and hence activated upon glucose depletion. This activation is required but is not sufficient for mediating glucose de-repression, indicating further glucose-dependent regulation mechanisms. Employing fluorescence recovery after photobleaching (FRAP) in conjunction with non-linear mixed effects modelling, we explore the spatial dynamics of Snf1 as well as the relationship between Snf1 phosphorylation and its target Mig1 controlled by hexose sugars. Our results suggest that inactivation of Snf1 modulates Mig1 localization and that the kinetic of Snf1 localization to the nucleus is modulated by the presence of non-fermentable carbon sources. Our data offer insight into the true complexity of regulation of this central signaling pathway in orchestrating cellular responses to fluctuating environmental cues. These insights not only expand our understanding of glucose homeostasis but also pave the way for further studies evaluating the importance of Snf1 localization in relation to its phosphorylation state and regulation of downstream targets.

nuclear localization

nutrient signaling

Snf1/Mig1 network

nonlinear mixed effect model

fluorescence recovery after photobleaching

yeast

Author

Svenja Braam

Chalmers, Mathematical Sciences, Applied Mathematics and Statistics

Farida Tripodi

University of Milano-Bicocca

Linnea Österberg

Chalmers, Mathematical Sciences, Applied Mathematics and Statistics

University of Milano-Bicocca

Sebastian Persson

Chalmers, Mathematical Sciences, Applied Mathematics and Statistics

Niek Welkenhuysen

Chalmers, Life Sciences, Systems and Synthetic Biology

University of Milano-Bicocca

Paola Coccetti

University of Milano-Bicocca

Marija Cvijovic

Chalmers, Mathematical Sciences, Applied Mathematics and Statistics

Microbial Cell

23112638 (eISSN)

Vol. 11 1 143-154

Integration av metabolism och signalöverföring: den AMP-aktivierade protein kinas SNF1 i jäst

Swedish Research Council (VR) (2016-03744), 2017-01-01 -- 2021-12-31.

Subject Categories

Biochemistry and Molecular Biology

DOI

10.15698/mic2024.05.822

PubMed

38756204

More information

Latest update

11/6/2024