Genome Characterization of Oleaginous Aspergillus oryzae BCC7051: A Potential Fungal-Based Platform for Lipid Production
Artikel i vetenskaplig tidskrift, 2018

The selected robust fungus, Aspergillus oryzae strain BCC7051 is of interest for biotechnological production of lipid-derived products due to its capability to accumulate high amount of intracellular lipids using various sugars and agro-industrial substrates. Here, we report the genome sequence of the oleaginous A. oryzae BCC7051. The obtained reads were de novo assembled into 25 scaffolds spanning of 38,550,958 bps with predicted 11,456 protein-coding genes. By synteny mapping, a large rearrangement was found in two scaffolds of A. oryzae BCC7051 as compared to the reference RIB40 strain. The genetic relationship between BCC7051 and other strains of A. oryzae in terms of aflatoxin production was investigated, indicating that the A. oryzae BCC7051 was categorized into group 2 nonaflatoxin-producing strain. Moreover, a comparative analysis of the structural genes focusing on the involvement in lipid metabolism among oleaginous yeast and fungi revealed the presence of multiple isoforms of metabolic enzymes responsible for fatty acid synthesis in BCC7051. The alternative routes of acetyl-CoA generation as oleaginous features and malate/citrate/pyruvate shuttle were also identified in this A. oryzae strain. The genome sequence generated in this work is a dedicated resource for expanding genome-wide study of microbial lipids at systems level, and developing the fungal-based platform for production of diversified lipids with commercial relevance.

Författare

Chinae Thammarongtham

King Mongkut's University of Technology Thonburi

Intawat Nookaew

University of Arkansas for Medical Sciences

Chalmers, Biologi och bioteknik, Systembiologi

Oak Ridge National Laboratory

Tayvich Vorapreeda

King Mongkut's University of Technology Thonburi

Tanawut Srisuk

King Mongkut's University of Technology Thonburi

Miriam L. Land

Oak Ridge National Laboratory

Sukanya Jeennor

Thailand National Center for Genetic Engineering and Biotechnology (BIOTEC)

K. Laoteng

Thailand National Center for Genetic Engineering and Biotechnology (BIOTEC)

Current Microbiology

0343-8651 (ISSN) 1432-0991 (eISSN)

Vol. 75 1 57-70

Ämneskategorier

Biokemi och molekylärbiologi

Mikrobiologi

Genetik

DOI

10.1007/s00284-017-1350-7