Jonathan Robinson

Publications (25)
Projects (0)

Showing 25 publications

2024

Brain energy metabolism is optimized to minimize the cost of enzyme synthesis and transport

Johan Gustafsson, Jonathan Robinson, Henrik Zetterberg et al

Proceedings of the National Academy of Sciences of the United States of America. Vol. 121 (7)

Journal article

2024

Metabolic collaboration between cells in the tumor microenvironment has a negligible effect on tumor growth

Johan Gustafsson, Fariba Roshanzamir, Anders Hagnestål et al

Innovation. Vol. 5 (2)

Journal article

2023

Generation and analysis of context-specific genome-scale metabolic models derived from single-cell RNA-Seq data

Johan Gustafsson, Petre Mihail Anton, Fariba Roshanzamir et al

Proceedings of the National Academy of Sciences of the United States of America. Vol. 120 (6)

Journal article

2022

Enhanced metabolism and negative regulation of ER stress support higher erythropoietin production in HEK293 cells

Rasool Saghaleyni, Magdalena Malm, Noah Moruzzi et al

Cell Reports. Vol. 39 (11)

Journal article

2022

Metastatic triple negative breast cancer adapts its metabolism to destination tissues while retaining key metabolic signatures

Fariba Roshanzamir, Jonathan Robinson, Daniel John Cook et al

Proceedings of the National Academy of Sciences of the United States of America. Vol. 119 (35)

Journal article

2022

Generation and analysis of context-specific genome-scale metabolic models derived from single-cell RNA-Seq data

Johan Gustafsson, Jonathan Robinson, Fariba Roshanzamir et al

Preprint

2022

Silencing of STE20-type kinase STK25 in human aortic endothelial and smooth muscle cells is atheroprotective

Emmelie Cansby, Sima Kumari, Mara Caputo et al

Communications Biology. Vol. 5 (1)

Journal article

2022

Cellular limitation of enzymatic capacity explains glutamine addiction in cancers

Johan Gustafsson, Fariba Roshanzamir, Anders Hagnestål et al

Preprint

2021

Machine learning-based investigation of the cancer protein secretory pathway

Rasool Saghaleyni, Muhammad Azam Sheikh, Pramod Bangalore et al

PLoS Computational Biology. Vol. 17 (4)

Journal article

2021

Genome-scale metabolic network reconstruction of model animals as a platform for translational research

Hao Wang, Jonathan Robinson, Pinar Kocabas et al

Proceedings of the National Academy of Sciences of the United States of America. Vol. 118 (30)

Journal article

2021

Multi-omic single-cell profiling demonstrates that competition for fatty acids and fatty acid oxidation enables tumor-infiltrating lymphocyte function and survival

Melisa Angela Paniagua, Cara Haymaker, Jay R. Adolacion et al

Journal for ImmunoTherapy of Cancer. Vol. 9, p. A199-A199

Other conference contribution

2021

BUTTERFLY: addressing the pooled amplification paradox with unique molecular identifiers in single-cell RNA-seq

Johan Gustafsson, Jonathan Robinson, Jens B Nielsen et al

Genome Biology. Vol. 22 (1)

Journal article

2021

Single-cell BCR and transcriptome analysis after influenza infection reveals spatiotemporal dynamics of antigen-specific B cells

Nimitha R. Mathew, Jayalal K. Jayanthan, Ilya V. Smirnov et al

Cell Reports. Vol. 35 (12)

Journal article

2021

UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana

Suphitcha Limjiasahapong, Khwanta Kaewnarin, Narumol Jariyasopit et al

Frontiers in Plant Science. Vol. 11

Journal article

2020

DSAVE: Detection of misclassified cells in single-cell RNA-Seq data

Johan Gustafsson, Jonathan Robinson, Juan Salvador Inda Diaz et al

PLoS ONE. Vol. 15 (12 December)

Journal article

2020

Deep Proteomic Deconvolution of Interferons and HBV Transfection Effects on a Hepatoblastoma Cell Line

Kenneth Hodge, Jiradej Makjaroen, Jonathan Robinson et al

ACS Omega. Vol. 5 (27), p. 16796-16810

Journal article

2020

An atlas of human metabolism

Jonathan Robinson, Pinar Kocabas, Hao Wang et al

Science signaling. Vol. 13 (624)

Journal article

2020

Sources of variation in cell-type RNA-Seq profiles

Johan Gustafsson, Felix Held, Jonathan Robinson et al

PLoS ONE. Vol. 15 (9), p. e0239495-

Journal article

2019

The human secretome

Mathias Uhlen, Max J. Karlsson, Andreas Hober et al

Science signaling. Vol. 12 (609)

Journal article

2019

A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome

Jonathan Robinson, Amir Feizi, Mathias Uhlen et al

Cell Reports. Vol. 26 (10), p. 2622-2635.e5

Journal article

2018

Targeting CDK2 overcomes melanoma resistance against BRAF and Hsp90 inhibitors

Alireza Azimi, Stefano Caramuta, Brinton Seashore-Ludlow et al

Molecular Systems Biology. Vol. 14 (3)

Journal article

2017

Anticancer drug discovery through genome-scale metabolic modeling

Jonathan Robinson, Jens B Nielsen

Current Opinion in Systems Biology. Vol. 4, p. 1-8

Review article

2017

An integrated network analysis reveals that nitric oxide reductase prevents metabolic cycling of nitric oxide by Pseudomonas aeruginosa

Jonathan Robinson, J. M. Jaslove, A. M. Murawski et al

Metabolic Engineering. Vol. 41, p. 67-81

Journal article

2016

Starved Escherichia coli preserve reducing power under nitric oxide stress

G. O. F. Gowers, Jonathan Robinson, M. P. Brynildsen

Biochemical and Biophysical Research Communications. Vol. 476 (1), p. 29-34

Journal article

2016

Integrative analysis of human omics data using biomolecular networks

Jonathan Robinson, Jens B Nielsen

Molecular BioSystems. Vol. 12 (10), p. 2953-2964

Review article

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