Jonathan Robinson

Showing 16 publications

2021

Genome-scale metabolic network reconstruction of model animals as a platform for translational research

Hao Wang, Jonathan Robinson, Pinar Kocabas et al
Proceedings of the National Academy of Sciences of the United States of America. Vol. 118 (30)
Journal article
2021

Machine learning-based investigation of the cancer protein secretory pathway

Rasool Saghaleyni, Muhammad Azam Sheikh, Pramod Bangalore et al
PLoS Computational Biology. Vol. 17 (4)
Journal article
2021

BUTTERFLY: addressing the pooled amplification paradox with unique molecular identifiers in single-cell RNA-seq

Johan Gustafsson, Jonathan Robinson, Jens B Nielsen et al
Genome Biology. Vol. 22 (1)
Journal article
2021

Single-cell BCR and transcriptome analysis after influenza infection reveals spatiotemporal dynamics of antigen-specific B cells

Nimitha R. Mathew, Jayalal K. Jayanthan, Ilya V. Smirnov et al
Cell Reports. Vol. 35 (12)
Journal article
2021

UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana

Suphitcha Limjiasahapong, Khwanta Kaewnarin, Narumol Jariyasopit et al
Frontiers in Plant Science. Vol. 11
Journal article
2020

Deep Proteomic Deconvolution of Interferons and HBV Transfection Effects on a Hepatoblastoma Cell Line

Kenneth Hodge, Jiradej Makjaroen, Jonathan Robinson et al
ACS Omega. Vol. 5 (27), p. 16796-16810
Journal article
2020

An atlas of human metabolism

Jonathan Robinson, Pinar Kocabas, Hao Wang et al
Science signaling. Vol. 13 (624)
Journal article
2020

DSAVE: Detection of misclassified cells in single-cell RNA-Seq data

Johan Gustafsson, Jonathan Robinson, Juan Salvador Inda Diaz et al
PLoS ONE. Vol. 15 (12 December)
Journal article
2020

Sources of variation in cell-type RNA-Seq profiles

Johan Gustafsson, Felix Held, Jonathan Robinson et al
PLoS ONE. Vol. 15 (9), p. e0239495-
Journal article
2019

The human secretome

Mathias Uhlen, Max J. Karlsson, Andreas Hober et al
Science signaling. Vol. 12 (609)
Journal article
2019

A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome

Jonathan Robinson, Amir Feizi, Mathias Uhlen et al
Cell Reports
Journal article
2018

Targeting CDK2 overcomes melanoma resistance against BRAF and Hsp90 inhibitors

Alireza Azimi, Stefano Caramuta, Brinton Seashore-Ludlow et al
Molecular Systems Biology. Vol. 14 (3)
Journal article
2017

Anticancer drug discovery through genome-scale metabolic modeling

Jonathan Robinson, Jens B Nielsen
Current Opinion in Systems Biology. Vol. 4, p. 1-8
Review article
2017

An integrated network analysis reveals that nitric oxide reductase prevents metabolic cycling of nitric oxide by Pseudomonas aeruginosa

Jonathan Robinson, J. M. Jaslove, A. M. Murawski et al
Metabolic Engineering. Vol. 41, p. 67-81
Journal article
2016

Integrative analysis of human omics data using biomolecular networks

Jonathan Robinson, Jens B Nielsen
Molecular BioSystems. Vol. 12 (10), p. 2953-2964
Review article
2016

Starved Escherichia coli preserve reducing power under nitric oxide stress

G. O. F. Gowers, Jonathan Robinson, M. P. Brynildsen
Biochemical and Biophysical Research Communications. Vol. 476 (1), p. 29-34
Journal article

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