Martin Nilsson Jacobi

Prefekt at Department of Energy and Environment

Martin Nilsson Jacobi is professor of complex systems at Chalmers. He has a background in theoretical physics but during his PhD studies he switched research direction into the interdisciplinary field of complex systems. His recent research has mainly been focused on hierarchical organization in dynamical systems, coarse graining in many particle systems, and prediction, design and control of self-organizing systems. Professor Nilsson Jacobi is also acting as head of the department for Energy and Environment.

Source: chalmers.se

Projects

2013–2016

Theory and design of self-assembling systems

Martin Nilsson Jacobi Department of Energy and Environment, Physical Resource Theory
Swedish Research Council (VR)

2012–2015

MATHEmatics of Multi-level Anticipatory Complex Systems (MATHEMACS)

Martin Nilsson Jacobi Department of Energy and Environment, Physical Resource Theory
EC, Seventh Framework program (FP7)

2011–2014

Emergence by Design (MD)

Martin Nilsson Jacobi Department of Energy and Environment, Physical Resource Theory
EC, Seventh Framework program (FP7)

2012–2015

Hierarchical Analysis of Complex Dynamical Systems (HIERATIC)

Martin Nilsson Jacobi Department of Energy and Environment, Physical Resource Theory
EC, Seventh Framework program (FP7)

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Publications

2016

How to select networks of marine protected areas for multiple species with different dispersal strategies

Per R. Jonsson, Martin Nilsson Jacobi, Per-Olav Moksnes et al
Diversity and Distributions: A journal of biological invasions and biodiversity. Vol. 22 (2), p. 161-173
Scientific journal article - peer reviewed
2015

Identifying new areas adding larval connectivity to existing networks of MPAs: The case of Kattegat and Skagerrak.

Per-Olav Moksnes, Per R. Jonsson, Martin Nilsson Jacobi et al
Report
2015

A design path for the hierarchical self-assembly of patchy colloidal particles

Erik Edlund, Oskar Lindgren, Martin Nilsson Jacobi et al
Soft Matter. Vol. 11 (19), p. 3913-3919
Scientific journal article - peer reviewed
2015

Extending networks of protected areas to optimize connectivity and population growth rate

M. Andrello, Martin Nilsson Jacobi, S. Manel et al
Ecography. Vol. 38 (3), p. 273-282
Scientific journal article - peer reviewed
2014

Larval connectivity and ecological coherence of marine protected areas (MPAs) in the Kattegat-Skagerrak region

Per-Olav Moksnes, Per R. Jonsson, Martin Nilsson Jacobi et al
Report
2014

Predicting self-assembled patterns on spheres with multicomponent coatings

Erik Edlund, Oskar Lindgren, Martin Nilsson Jacobi et al
Soft Matter. Vol. 10 (17), p. 2955-2960
Scientific journal article - peer reviewed
2013

Using the uncertainty principle to design simple interactions for targeted self-assembly

Erik Edlund, Oskar Lindgren, Martin Nilsson Jacobi et al
Journal of Chemical Physics. Vol. 139 (2), p. 024107
Scientific journal article - peer reviewed
2012

Hierarchical dynamics

Martin Nilsson Jacobi,
Computational Complexity: Theory, Techniques, and Applications
Chapter in monograph, book
2012

Identification of subpopulations from connectivity matrices

Martin Nilsson Jacobi, Carl André, K. Döös et al
Ecography. Vol. 35 (11), p. 1004-1016
Scientific journal article - peer reviewed
2012

Optimal selection of marine protected areas based on connectivity and habitat quality

Moa Berglund, Martin Nilsson Jacobi, Per R. Jonsson et al
Ecological Modelling. Vol. 240, p. 105-112
Scientific journal article - peer reviewed
2012

Chiral Surfaces Self-Assembling in One-Component Systems with Isotropic Interactions

Erik Edlund, Oskar Lindgren, Martin Nilsson Jacobi et al
Physical Review Letters. Vol. 108 (16), p. 165502
Scientific journal article - peer reviewed
2011

A mixed basis approach in the SGP-limit

Matias Nordin, Martin Nilsson Jacobi, Magnus Nydén et al
Journal of Magnetic Resonance. Vol. 212 (2), p. 274-279
Scientific journal article - peer reviewed
2011

Novel Self-Assembled Morphologies from Isotropic Interactions

Erik Edlund, Oskar Lindgren, Martin Nilsson Jacobi et al
Physical Review Letters. Vol. 107 (8), p. 085501
Scientific journal article - peer reviewed
2011

Designing Isotropic Interactions for Self-Assembly of Complex Lattices

Erik Edlund, Oskar Lindgren, Martin Nilsson Jacobi et al
Physical Review Letters. Vol. 107 (8), p. 085503
Scientific journal article - peer reviewed
2011

Optimal networks of nature reserves can be found through eigenvalue perturbation theory of the connectivity matrix

Martin Nilsson Jacobi, Per R. Jonsson,
Ecological Applications. Vol. 21 (5), p. 1861-1870
Scientific journal article - peer reviewed
2010

A Robust Spectral Method for Finding Lumpings and Meta Stable States of Non-Reversible Markov Chains

Martin Nilsson Jacobi,
Electronic Transactions on Numerical Analysis. Vol. 37, p. 296-306
Scientific journal article - peer reviewed
2010

Identification of metastable states in peptide's dynamics

Svitlana Ruzhytska, Martin Nilsson Jacobi, C. H. Jensen et al
Journal of Chemical Physics. Vol. 133 (16)
Scientific journal article - peer reviewed
2010

Universality of Striped Morphologies

Erik Edlund, Martin Nilsson Jacobi,
Physical Review Letters. Vol. 105 (13), p. 137203
Scientific journal article - peer reviewed
2010

Determining interaction rules in animal swarms

A. Eriksson, Martin Nilsson Jacobi, J. Nystrom et al
Behavioral Ecology. Vol. 21 (5), p. 1106-1111
Scientific journal article - peer reviewed
2010

A method for finding aggregated representations of linear dynamical systems

Olof Görnerup, Martin Nilsson Jacobi,
Advances in Complex Systems. Vol. 13 (2), p. 199-215
Scientific journal article - peer reviewed
2010

Renormalization of Cellular Automata and Self-Similarity

Erik Edlund, Martin Nilsson Jacobi,
Journal of statistical physics. Vol. 139 (6), p. 972-984
Scientific journal article - peer reviewed
2010

A model-independent approach to infer hierarchical codon substitution dynamics

Olof Görnerup, Martin Nilsson Jacobi,
BMC Bioinformatics. Vol. 11
Scientific journal article - peer reviewed
2009

Deriving time-dependent diffusion and relaxation rate in porous systems using eigenfunctions of the Laplace operator

Matias Nordin, Martin Nilsson Jacobi, Magnus Nydén et al
Journal of Magnetic Resonance. Vol. 201, p. 205-211
Scientific journal article - peer reviewed
2009

On the microscopic foundation of dissipative particle dynamics

Anders Eriksson, Martin Nilsson Jacobi, Johan Nyström et al
Europhysics Letters. Vol. 86 (4)
Scientific journal article - peer reviewed
2009

Bottom-up derivation of an effective thermostat for united atoms simulations of water

Anders Eriksson, Martin Nilsson Jacobi, Johan Nyström et al
JOURNAL OF CHEMICAL PHYSICS. Vol. 130 (16)
Scientific journal article - peer reviewed
2009

A spectral method for aggregating variables in linear dynamical systems with application to cellular automata renormalization

Martin Nilsson Jacobi, Olof Görnerup,
Advances in Complex Systems. Vol. 12 (2), p. 131-155
Scientific journal article - peer reviewed
2009

A method for estimating the interactions in dissipative particle dynamics from particle trajectories

A. Eriksson, Martin Nilsson Jacobi, Kolbjörn Tunström et al
Journal of Physics: Condensed Matter. Vol. 21 (9), p. art. no. 095401
Scientific journal article - peer reviewed
2008

Effective thermostat induced by coarse graining of simple point charge water

Anders Eriksson, Martin Nilsson Jacobi, Johan Nyström et al
Journal of Chemical Physics. Vol. 129 (2)
Scientific journal article - peer reviewed
2008

Using force covariance to derive effective stochastic interactions in dissipative particle dynamics.

Anders Eriksson, Martin Nilsson Jacobi, Johan Nyström et al
Using force covariance to derive effective stochastic interactions in dissipative particle dynamics.. Vol. 77 (1)
Scientific journal article - peer reviewed
2008

A Method For Inferring Hierarchical Dynamics In Stochastic Processes

Martin Nilsson Jacobi, Olof Görnerup,
Advances in Complex Systems. Vol. 11 (1), p. 1-16
Scientific journal article - peer reviewed
2008

Effective thermostat induced by coarse graining of simple point charge water

Martin Nilsson Jacobi, Johan Nyström, Kolbjörn Tunström et al
Journal of Chemical Physics. Vol. 129 (2)
Scientific journal article - peer reviewed
2007

Emergence of protocellular growth laws

T. Rocheleau, Steen Rasmussen, P. E. Nielsen et al
Philosophical Transactions of the Royal Society B-Biological Sciences. Vol. 362 (1486), p. 1841-1845
Scientific journal article - peer reviewed