yApoptosis: yeast apoptosis database
Journal article, 2013

In the past few years, programmed cell death (PCD) has become a popular research area due to its fundamental aspects and its links to human diseases. Yeast has been used as a model for studying PCD, since the discovery of morphological markers of apoptotic cell death in yeast in 1997. Increasing knowledge in identification of components and molecular pathways created a need for organization of information. To meet the demands from the research community, we have developed a curated yeast apoptosis database, yApoptosis. The database structurally collects an extensively curated set of apoptosis, PCD and related genes, their genomic information, supporting literature and relevant external links. A web interface including necessary functions is provided to access and download the data. In addition, we included several networks where the apoptosis genes or proteins are involved, and present them graphically and interactively to facilitate rapid visualization. We also promote continuous inputs and curation by experts. yApoptosis is a highly specific resource for sharing information online, which supports researches and studies in the field of yeast apoptosis and cell death.

SYSTEMS BIOLOGY

GENOME

PROGRAMMED CELL-DEATH

PROTEIN-INTERACTION NETWORKS

ATLAS

COMPLEXES

SACCHAROMYCES-CEREVISIAE

Author

Kwanjeera Wanichthanarak

Chalmers, Chemical and Biological Engineering, Life Sciences, System Biology

Marija Cvijovic

Chalmers, Mathematical Sciences, Mathematics

University of Gothenburg

Andrea Molt

Chalmers, Chemical and Biological Engineering

Dina Petranovic Nielsen

Chalmers, Chemical and Biological Engineering, Life Sciences, System Biology

Database : the journal of biological databases and curation

1758-0463 (ISSN)

Vol. 2013 Art. no. bat068

Industrial Systems Biology of Yeast and A. oryzae (INSYSBIO)

European Commission (FP7), 2010-01-01 -- 2014-12-31.

Subject Categories

Biochemistry and Molecular Biology

Bioinformatics and Systems Biology

Areas of Advance

Life Science Engineering (2010-2018)

DOI

10.1093/database/bat068

More information

Latest update

2/14/2019