Graham Kemp
Biträdande professor vid
Chalmers, Data- och informationsteknik, Data Science
Link to personal page
Källa: chalmers.se
Visar 34 publikationer
2016
Computational protein modelling based on limited sets of constraints
Maryana Wånggren, Martin Billeter, Graham Kemp
Proceedings of the 12th International Workshop on Constraint-Based Methods for Bioinformatics, p. 99-113
Paper i proceeding
2013
Computation of Binding Energies Including Their Enthalpy and Entropy Components for Protein-Ligand Complexes Using Support Vector Machines
Ashok Krishna Chaitanya Koppisetty, M. Frank, Graham Kemp et al
Journal of Chemical Information and Computer Sciences. Vol. 53 (10), p. 2559-2570
Artikel i vetenskaplig tidskrift
2011
Standardizing radiation oncology data for future modelling of side effects after radiation therapy
Caroline Olsson, Graham Kemp
1st International Workshop on Managing Interoperability and compleXity in Health Systems, MIXHS'11, Collocated with the 20th ACM International Conference on Information and Knowledge Management, CIKM 2011 Glasgow 28 October 2011 through 28 October 2011. Vol. oct 28, p. 67-70
Paper i proceeding
2010
Identification of protein binding surfaces using surface triplet propensities
W. Mehio, Graham Kemp, P. Taylor et al
Bioinformatics. Vol. 26 (20), p. 2549-2555
Artikel i vetenskaplig tidskrift
2010
Data Integration in the Life Sciences 7th International Conference, DILS 2010, Gothenburg, Sweden, August 25-27, 2010. Proceedings
Patrick Lambrix, Graham Kemp
Samlingsverk (redaktörskap)
2010
An automated framework for understanding structural variations in the binding grooves of MHC class II molecules
Kalidas Yeturu, Tapani Utriainen, Graham Kemp et al
BMC Bioinformatics. Vol. 11 (Suppl 1), p. S55-
Artikel i vetenskaplig tidskrift
2009
An analytical solution for finding voids and bottlenecks within macromolecules
Fredrik Boulund, Viktor Jonsson, Erik Sterner et al
3DSig 2009: The 5th Structural Bioinformatics and Computational Biophysics Meeting, Stockholm, Sweden, 27-28 June 2009, p. 77-78
Poster (konferens)
2009
Deriving binding site signatures in MHC Class II molecules, using a novel algorithm
Kalidas Yeturu, Graham Kemp, Nagasuma Chandra
17th Annual International Conference on Intelligent Systems for Molecular Biology & 8th European Conference on Computational Biology (ISMB/ECCB 2009), Stockholm, Sweden, 27 June to 2 July 2009
Poster (konferens)
2009
Uniform Query Processing in a Federation of RDFS and Relational Resources
Merja Karjalainen, Graham Kemp
International Database Engineering and Applications Symposium (IDEAS'09), Proceedings, p. 315-320
Paper i proceeding
2009
STP: A Program to Predict Protein Binding Surfaces
Wissam Mehio, Graham Kemp, Paul Taylor et al
3DSig 2009: The 5th Structural Bioinformatics and Computational Biophysics Meeting, Stockholm, Sweden, 27-28 June 2009, p. 51-52
Poster (konferens)
2009
Predicting functional upstream open reading frames in Saccharomyces cerevisiae
Selpi Selpi, Christopher H. Bryant, Graham Kemp et al
BMC Bioinformatics. Vol. 10, p. 451-
Artikel i vetenskaplig tidskrift
2008
A Functional Data Model Approach to Querying RDF/RDFS Data
João Martins, Rui Nunes, Merja Karjalainen et al
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 5071, p. 153-164
Paper i proceeding
2008
An Ontology-Based Approach to Car Simulation and Design
Stuart Chalmers, Josef Nilsson, Håkan Edler et al
Third Asian Semantic Web Conference, ASWC2008 Bangkok, Thailand December 2008, Workshops Proceedings, p. 270-275
Paper i proceeding
2008
Using mRNA Secondary Structure Predictions Improves Recognition of Known Yeast Functional uORFs
Selpi Selpi, C. H. Bryant, Graham Kemp
Wehenkel, L., d'Alché-Buc, F., Moreau, Y. and Geurts, P. (eds.) MLSB08, The Second International Workshop on Machine Learning in Systems Biology, Brussels, 13-14 September 2008., p. 85-93
Paper i proceeding
2007
PROPHECY—a yeast phenome database, update 2006
Luciano Fernandez-Ricaud, Jonas Warringer, Elke Ericson et al
Nucleic Acids Research. Vol. 35 (SUPPL. 1), p. D463-D467
Artikel i vetenskaplig tidskrift
2007
Using surface patch profiles to predict protein-protein binding surfaces
Wissam Mehio, Graham Kemp
3DSig: The 3rd Structural Bioinformatics and Computational Biophysics Meeting, Vienna, Austria, 19-20 July 2007, p. 43-44
Poster (konferens)
2007
Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation
Marija Cvijovic, Daniel Dalevi, Elizabeth Bilsland et al
BMC Bioinformatics. Vol. 8, p. 295-
Artikel i vetenskaplig tidskrift
2007
Using long fragments to reconstruct RNA backbones
Tapani Utriainen, Graham Kemp
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, p. 1424-1428
Paper i proceeding
2007
Using Inductive Logic Programming to Predict Functional Upstream Open Reading Frames in Yeast
Selpi Selpi, C. H. Bryant, Graham Kemp et al
15th Annual International Conference on Intelligent Systems for Molecular Biology & 6th European Conference on Computational Biology (ISMB/ECCB 2007), Vienna, Austria, 21-25 July 2007
Poster (konferens)
2006
A First Step towards Learning which uORFs Regulate Gene Expression
Selpi Selpi, C. H. Bryant, Graham Kemp et al
Journal of integrative bioinformatics. Vol. 3 (2), p. 31-
Artikel i vetenskaplig tidskrift
2006
Capturing Quantified Constraints in FOL, Through Interaction with a Relationship Graph
P. M. D. Gray, Graham Kemp
Managing Knowledge in a World of Networks: 15th International Conference, EKAW 2006, Lecture Notes in Computer Science. Vol. 4248, p. 19-26
Paper i proceeding
2005
Models of Database Interconnectivity
Graham Kemp
Database Annotation in Molecular Biology: Principles and Practice, p. 203-221
Kapitel i bok
2005
PROPHECY - a database for high-resolution phenomics
Luciano Fernandez-Ricaud, Jonas Warringer, Elke Ericson et al
Nucleic Acids Research. Vol. 33 (DATABASE ISS.), p. D369-D373
Artikel i vetenskaplig tidskrift
2005
The use of a genetic algorithm search for molecular mechanics (MM3)-based conformational analysis of oligosaccharides.
Per-Georg Nyholm, Avi Nahmany, F. Strino et al
Carbohydrate Research. Vol. 340 (5), p. 1059-1064
Artikel i vetenskaplig tidskrift
2005
Predicting peptide interactions with model class II MHC structures
Martin T. Swain, Anthony J. Brooks, Graham Kemp
International Journal on Artificial Intelligence Tools. Vol. 14 (4), p. 561-575
Artikel i vetenskaplig tidskrift
2005
Conformation of the exopolysaccharide of Burkholderia cepacia predicted with molecular mechanics (MM3) using genetic algorithm search.
F. Strino, Avi Nahmany, Jimmy Rosen et al
Carbohydrate Research. Vol. 340 (5), p. 1019-1024
Artikel i vetenskaplig tidskrift
2005
Using the Functional Data Model to Store and Query Recursive Biological Data
Graham Kemp, Selpi Selpi, Merja Karjalainen
Workshop on Database Issues in Biological Databases (DBiBD),8-9 January 2005, Edinburgh, UK, p. 24-28
Konferensbidrag (offentliggjort, men ej förlagsutgivet)
2004
Optimisation Strategies for Functional Queries in a Distributed Environment
Graham Kemp, Peter M.D. Gray, Suzanne M. Embury
The Functional Approach to Data Management: Modeling, Analyzing and Integrating Heterogeneous Data, p. 189-210
Kapitel i bok
2004
Pathway and Protein Interaction Data: from XML to FDM Database
Graham Kemp, Selpi Selpi
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 2994, p. 212-219
Artikel i vetenskaplig tidskrift
2004
An Expressive Functional Data Model and Query Language for Bioinformatics Data Integration
Peter M.D. Gray, Graham Kemp
The Functional Approach to Data Management: Modeling, Analyzing and Integrating Heterogeneous Data, p. 166-188
Kapitel i bok
2004
Analysis of Fish IL-1beta and Derived Peptide Sequences Indicates Conserved Structures with Species-Specific IL-1 Receptor Binding: Implications for Pharmacological Design
Antonis I. Koussounadis, David W. Ritchie, Graham Kemp et al
Current Pharmaceutical Design. Vol. 10 (31), p. 3857-3871
Artikel i vetenskaplig tidskrift
2003
P/FDM Mediator for a Bioinformatics Database Federation
Graham Kemp, Peter M.D. Gray
Bioinformatics: Managing Scientific Data, p. 249-275
Kapitel i bok
2002
Modelling Biological Data in Hierarchies
Graham Kemp, Peter M. D. Gray
10th International Conference on Intelligent Systems for Molecular Biology, Edmonton, Canada, 3-7 August 2002
Konferensbidrag (offentliggjort, men ej förlagsutgivet)
2002
Architecture of a mediator for a bioinformatics database federation
Graham Kemp, Nicos Angelopoulos, Peter M.D. Gray
IEEE Transactions on Information Technology in Biomedicine. Vol. 6 (2), p. 116-122
Artikel i vetenskaplig tidskrift
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