How, not if, is the question mycologists should be asking about DNA-based typification
Artikel i vetenskaplig tidskrift, 2023
Fungal metabarcoding of substrates such as soil, wood, and water is uncovering an unprecedented number of fungal species that do not seem to produce tangible morphological structures and that defy our best attempts at cultivation, thus falling outside the scope of the International Code of Nomenclature for algae, fungi, and plants. The present study uses the new, ninth release of the species hypotheses of the UNITE database to show that species discovery through environmental sequencing vastly outpaces traditional, Sanger sequencing-based efforts in a strongly increasing trend over the last five years. Our findings chal-lenge the present stance of some in the mycological community - that the current situation is satisfactory and that no change is needed to "the code" - and suggest that we should be discussing not whether to allow DNA-based descriptions (typifications) of species and by extension higher ranks of fungi, but what the precise requirements for such DNA-based typifications should be. We submit a tentative list of such criteria for further discussion. The present authors hope for a revitalized and deepened discussion on DNA-based typification, because to us it seems harmful and counter-productive to intentionally deny the overwhelming majority of extant fungi a formal standing under the International Code of Nomenclature for algae, fungi, and plants.
taxonomy
nomenclature
type principle
ICN
species description
Dark taxa
Författare
R. Henrik Nilsson
Göteborgs universitet
Martin Ryberg
Uppsala universitet
Christian Wurzbacher
Technische Universität München
Leho Tedersoo
King Saud University
Tartu Ülikool
Sten Anslan
Tartu Ülikool
Sergei Polme
Tartu Ülikool
Viacheslav Spirin
Helsingin Yliopisto
Göteborgs universitet
Vladimir Mikryukov
Tartu Ülikool
Sten Svantesson
Göteborgs universitet
Uppsala universitet
Martin Hartmann
Eidgenössische Technische Hochschule Zürich (ETH)
Charlotte Lennartsdotter
Göteborgs universitet
Pauline Belford
Chalmers, Data- och informationsteknik, Interaktionsdesign och Software Engineering
Maryia Khomich
Universitetet i Bergen
Alice Retter
Universität Wien
Natalia Corcoll
Göteborgs universitet
Daniela Gomez Martinez
Göteborgs universitet
Tobias Jansson
Göteborgs universitet
Duong Vu
Westerdijk Fungal Biodiversity Institute
Marisol Sanchez-Garcia
Sveriges lantbruksuniversitet (SLU)
Erik Kristiansson
Chalmers, Matematiska vetenskaper, Tillämpad matematik och statistik
Göteborgs universitet
Kessy Abarenkov
Tartu Ülikool
MycoKeys
1314-4057 (ISSN) 1314-4049 (eISSN)
96 143-157Ämneskategorier
Botanik
Biologisk systematik
Ekologi
DOI
10.3897/mycokeys.96.102669