Fluorescence-detected interactions of oligonucleotides in RecA complexes
Artikel i vetenskaplig tidskrift, 1995
A technique has been developed to probe directly RecA-DNA interactions by the use of the fluorescent chromophore, (+)anti-benzo(a)pyrene-7,8-dihydrodiol-9,10-epoxide (BPDE), covalently attached to DNA, The 24-mer oligonucleotide 5'-d(CTACTAAACATGTACAAATCATCC) was specifically modified on the exocyclic nitrogen of the central guanine, to yield a trans-adduct. Upon interaction of the modified oligonucleotide with RecA we find an increase in BPDE fluorescence and a rather high fluorescence anisotropy, suggesting a restricted motion of the BPDE-oligonucleotide in the protein filament. In the presence of the cofactor ATP gamma S, binding of two oligonuclotides, identical or complementary in sequence, in the RecA filament is possible, The RecA-DNA complex is, however, more stable when the sequences are complementary; in addition, a shift in the BPDE emission peaks is observed, In the presence of ATP (and an ATP regeneration system), the RecA-DNA interaction between two complementary oligonucleotides is changed, and we now find protein-mediated renaturation to occur.
mechanism
solution
fluorescence
recombination
linear dichroism
escherichia-coli
renaturation
protein
genetic-recombination
stoichiometry
coordination
reca
spectroscopy
benzo(a)pyrenediolepoxide
conformation
dna complexes
Författare
Pernilla Wittung
Institutionen för fysikalisk kemi
M. Funk
B. Jernstrom
Bengt Nordén
Institutionen för fysikalisk kemi
M. Takahashi
Publicerad i
FEBS Letters
0014-5793 (ISSN) 18733468 (eISSN)
Vol. 368 Nummer/häfte 1 s. 64-68Kategorisering
Ämneskategorier (SSIF 2011)
Biokemi och molekylärbiologi
Identifikatorer
DOI
10.1016/0014-5793(95)00600-E