Amir Feizi

Showing 17 publications


Editorial: Genomic strategies for efficient microbial cell factories

Eugene Fletcher, Yun Chen, Luis Caspeta-Guadarrama et al
Frontiers in Bioengineering and Biotechnology. Vol. 10
Other text in scientific journal

Improving recombinant protein production by yeast through genome-scale modeling using proteome constraints

Feiran Li, Yu Chen, Qi Qi et al
Nature Communications. Vol. 13 (1)
Journal article

Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion

Jahir M. Gutierrez, Amir Feizi, Shangzhong Li et al
Nature Communications. Vol. 11 (1)
Journal article

A Systematic Investigation of the Malignant Functions and Diagnostic Potential of the Cancer Secretome

Jonathan Robinson, Amir Feizi, Mathias Uhlen et al
Cell Reports. Vol. 26 (10), p. 2622-2635.e5
Journal article

Autophagy induction regulates influenza virus replication in a time-dependent manner

Neda Feizi, Parvaneh Mehrbod, Bizhan Romani et al
Journal of Medical Microbiology. Vol. 66 (4), p. 536-541
Journal article

Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments.

Eugene Fletcher, Amir Feizi, Mark Bisschops et al
Metabolic Engineering. Vol. 39, p. 19-28
Journal article

Defining the human copper proteome and analysis of its expression variation in cancers.

Stephanie Blockhuys, Emanuele Celauro, C. Hildesjo et al
Metallomics. Vol. 9 (2), p. 112-123
Journal article

Human protein secretory pathway genes are expressed in a tissue-specific pattern to match processing demands of the secretome

Amir Feizi, Francesco Gatto, Mathias Uhlen et al
npj Systems Biology and Applications. Vol. 3 (1)
Journal article

Strategies to improve usability and preserve accuracy in biological sequence databases

Johan Bengtsson-Palme, Fredrik Boulund, Robert Edström et al
Proteomics. Vol. 16 (18), p. 2454-2460
Journal article

HCSD: The human cancer secretome database

Amir Feizi, Amir Banaei Esfahani, Jens B Nielsen
Database : the journal of biological databases and curation. Vol. 2015
Journal article

RNA-seq analysis of Pichia anomala reveals important mechanisms required for survival at low pH

Eugene Fletcher, Amir Feizi, S.S. Kim et al
Microbial Cell Factories. Vol. 14 (1)
Journal article

Altered sterol composition renders yeast thermotolerant

Luis Caspeta-Guadarrama, Yun Chen, PAYAM GHIACI et al
Science. Vol. 346 (6205), p. 75-78
Journal article

Genome-scale analysis of the high-efficient protein secretion system of Aspergillus oryzae

Lifang Liu, Amir Feizi, Tobias Österlund et al
BMC Systems Biology. Vol. 8 (73)
Journal article

Genome-Scale Modeling of the Protein Secretory Machinery in Yeast

Amir Feizi, Tobias Österlund, Dina Petranovic Nielsen et al
PLoS ONE. Vol. 8 (5)
Journal article

Hybrid-Controlled Neurofuzzy Networks Analysis Resulting in Genetic Regulatory Networks Reconstruction

R. Manshaei, P. Sobhe Bidari, M. Aliyari Shoorehdeli et al
ISRN Bioinformatics
Journal article

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