Raphael Ferreira

Showing 21 publications

2022

Fluorescence-Activated Cell Sorting as a Tool for Recombinant Strain Screening

Christos Skrekas, Raphael Ferreira, Florian David
Methods in Molecular Biology. Vol. 2513, p. 39-57
Book chapter
2021

Increased demand for NAD<sup>+</sup> relative to ATP drives aerobic glycolysis

Alba Luengo, Zhaoqi Li, Dan Y. Gui et al
Molecular Cell. Vol. 81 (4), p. 691-707.e6
Journal article
2021

Rational gRNA design based on transcription factor binding data

David Bergenholm, Yasaman Dabirian, Raphael Ferreira et al
Synthetic Biology. Vol. 6 (1)
Journal article
2021

Fatty acid synthesis is required for breast cancer brain metastasis

Gino B. Ferraro, Ahmed Ali, Alba Luengo et al
Nature Cancer. Vol. 2 (4), p. 414-428
Journal article
2020

An atlas of human metabolism

Jonathan Robinson, Pinar Kocabas, Hao Wang et al
Science signaling. Vol. 13 (624)
Journal article
2020

Dissecting cell-type-specific metabolism in pancreatic ductal adenocarcinoma

Allison N. Lau, Zhaoqi Li, Laura V. Danai et al
eLife. Vol. 9, p. 1-35
Journal article
2020

Enabling large-scale genome editing at repetitive elements by reducing DNA nicking

Cory J. Smith, Oscar Castanon, Khaled Said et al
Nucleic Acids Research. Vol. 48 (9), p. 5183-5195
Journal article
2020

Pan-cancer analysis of the metabolic reaction network

Francesco Gatto, Raphael Ferreira, Jens B Nielsen
Metabolic Engineering. Vol. 57, p. 51-62
Journal article
2019

Tackling Cancer with Yeast-Based Technologies

Raphael Ferreira, Angelo Limeta, Jens B Nielsen
Trends in Biotechnology. Vol. 37 (6), p. 592-603
Review article
2019

Model-Assisted Fine-Tuning of Central Carbon Metabolism in Yeast through dCas9-Based Regulation

Raphael Ferreira, Christos Skrekas, Alex Hedin et al
ACS Synthetic Biology. Vol. 8 (11), p. 2457-2463
Journal article
2018

Metabolic engineering of Saccharomyces cerevisiae for overproduction of triacylglycerols

Raphael Ferreira, Paulo Teixeira, Michael Gossing et al
Metabolic Engineering Communications. Vol. 6, p. 22-27
Journal article
2018

Advancing biotechnology with CRISPR/Cas9: recent applications and patent landscape

Raphael Ferreira, Florian David, Jens B Nielsen
Journal of Industrial Microbiology and Biotechnology. Vol. 45 (7), p. 467-480
Review article
2018

Redirection of lipid flux toward phospholipids in yeast increases fatty acid turnover and secretion

Raphael Ferreira, Paulo Teixeira, Verena Siewers et al
Proceedings of the National Academy of Sciences of the United States of America. Vol. 115 (6), p. 1262-1267
Journal article
2018

Multiplexed CRISPR/Cas9 Genome Editing and Gene Regulation Using Csy4 in Saccharomyces cerevisiae

Raphael Ferreira, Christos Skrekas, Jens B Nielsen et al
ACS Synthetic Biology. Vol. 7 (1), p. 10-15
Journal article
2017

Dynamic regulation of fatty acid pools for improved production of fatty alcohols in Saccharomyces cerevisiae

Paulo Teixeira, Raphael Ferreira, Yongjin Zhou et al
Microbial Cell Factories. Vol. 16 (1), p. 45-
Journal article
2017

Exploiting off-targeting in guide-RNAs for CRISPR systems for simultaneous editing of multiple genes

Raphael Ferreira, Francesco Gatto, Jens B Nielsen
FEBS Letters. Vol. 591 (20), p. 3288-3295
Journal article
2017

Transcriptional reprogramming in yeast using dCas9 and combinatorial gRNA strategies

E. D. Jensen, Raphael Ferreira, T. Jakociunas et al
Microbial Cell Factories. Vol. 16 (1), p. 46-
Journal article
2017

Effects of acetoacetyl-CoA synthase expression on production of farnesene in Saccharomyces cerevisiae

Stefan Tippmann, Raphael Ferreira, Verena Siewers et al
Journal of Industrial Microbiology and Biotechnology. Vol. 44 (6), p. 911-922
Journal article
2015

Molecular recognition in naphthoquinone derivatives - G-quadruplex complexes by NMR

B. Riva, Raphael Ferreira, L. Musso et al
Biochimica et Biophysica Acta - General Subjects. Vol. 1850 (4), p. 673-680
Journal article
2014

Photoswitch kinase inhibitors

Raphael Ferreira, Jesper Nilsson, C. Solano et al
Purinergic Signalling. Vol. 10 (4), p. 767-768
Magazine article

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