Raphael Ferreira

Publications (21)
Projects (0)

Showing 21 publications

2022

Fluorescence-Activated Cell Sorting as a Tool for Recombinant Strain Screening

Christos Skrekas, Raphael Ferreira, Florian David

Methods in Molecular Biology. Vol. 2513, p. 39-57

Book chapter

2021

Increased demand for NAD<sup>+</sup> relative to ATP drives aerobic glycolysis

Alba Luengo, Zhaoqi Li, Dan Y. Gui et al

Molecular Cell. Vol. 81 (4), p. 691-707.e6

Journal article

2021

Rational gRNA design based on transcription factor binding data

David Bergenholm, Yasaman Dabirian, Raphael Ferreira et al

Synthetic Biology. Vol. 6 (1)

Journal article

2021

Fatty acid synthesis is required for breast cancer brain metastasis

Gino B. Ferraro, Ahmed Ali, Alba Luengo et al

Nature Cancer. Vol. 2 (4), p. 414-428

Journal article

2020

An atlas of human metabolism

Jonathan Robinson, Pinar Kocabas, Hao Wang et al

Science signaling. Vol. 13 (624)

Journal article

2020

Enabling large-scale genome editing at repetitive elements by reducing DNA nicking

Cory J. Smith, Oscar Castanon, Khaled Said et al

Nucleic Acids Research. Vol. 48 (9), p. 5183-5195

Journal article

2020

Dissecting cell-type-specific metabolism in pancreatic ductal adenocarcinoma

Allison N. Lau, Zhaoqi Li, Laura V. Danai et al

eLife. Vol. 9, p. 1-35

Journal article

2020

Pan-cancer analysis of the metabolic reaction network

Francesco Gatto, Raphael Ferreira, Jens B Nielsen

Metabolic Engineering. Vol. 57, p. 51-62

Journal article

2019

Tackling Cancer with Yeast-Based Technologies

Raphael Ferreira, Angelo Limeta, Jens B Nielsen

Trends in Biotechnology. Vol. 37 (6), p. 592-603

Review article

2019

Model-Assisted Fine-Tuning of Central Carbon Metabolism in Yeast through dCas9-Based Regulation

Raphael Ferreira, Christos Skrekas, Alex Hedin et al

ACS Synthetic Biology. Vol. 8 (11), p. 2457-2463

Journal article

2019

Advancing CRISPR technologies to engineer yeast metabolism

Raphael Ferreira

Doctoral thesis

2018

Advancing biotechnology with CRISPR/Cas9: recent applications and patent landscape

Raphael Ferreira, Florian David, Jens B Nielsen

Journal of Industrial Microbiology and Biotechnology. Vol. 45 (7), p. 467-480

Review article

2018

Multiplexed CRISPR/Cas9 Genome Editing and Gene Regulation Using Csy4 in Saccharomyces cerevisiae

Raphael Ferreira, Christos Skrekas, Jens B Nielsen et al

ACS Synthetic Biology. Vol. 7 (1), p. 10-15

Journal article

2018

Redirection of lipid flux toward phospholipids in yeast increases fatty acid turnover and secretion

Raphael Ferreira, Paulo Teixeira, Verena Siewers et al

Proceedings of the National Academy of Sciences of the United States of America. Vol. 115 (6), p. 1262-1267

Journal article

2018

Metabolic engineering of Saccharomyces cerevisiae for overproduction of triacylglycerols

Raphael Ferreira, Paulo Teixeira, Michael Gossing et al

Metabolic Engineering Communications. Vol. 6, p. 22-27

Journal article

2017

Exploiting off-targeting in guide-RNAs for CRISPR systems for simultaneous editing of multiple genes

Raphael Ferreira, Francesco Gatto, Jens B Nielsen

FEBS Letters. Vol. 591 (20), p. 3288-3295

Journal article

2017

Dynamic regulation of fatty acid pools for improved production of fatty alcohols in Saccharomyces cerevisiae

Paulo Teixeira, Raphael Ferreira, Yongjin Zhou et al

Microbial Cell Factories. Vol. 16 (1), p. 45-

Journal article

2017

Transcriptional reprogramming in yeast using dCas9 and combinatorial gRNA strategies

E. D. Jensen, Raphael Ferreira, T. Jakociunas et al

Microbial Cell Factories. Vol. 16 (1), p. 46-

Journal article

2017

Effects of acetoacetyl-CoA synthase expression on production of farnesene in Saccharomyces cerevisiae

Stefan Tippmann, Raphael Ferreira, Verena Siewers et al

Journal of Industrial Microbiology and Biotechnology. Vol. 44 (6), p. 911-922

Journal article

2015

Molecular recognition in naphthoquinone derivatives - G-quadruplex complexes by NMR

B. Riva, Raphael Ferreira, L. Musso et al

Biochimica et Biophysica Acta - General Subjects. Vol. 1850 (4), p. 673-680

Journal article

2014

Photoswitch kinase inhibitors

Raphael Ferreira, Jesper Nilsson, C. Solano et al

Purinergic Signalling. Vol. 10 (4), p. 767-768

Magazine article

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