Sergio Velasco

Visar 27 publikationer

2017

Symmetries and nonequilibrium thermodynamics

Sergio Velasco
Physical Review E. Vol. 95 (6)
Artikel i vetenskaplig tidskrift
2017

Transcriptional hallmarks of cancer cell lines reveal an emerging role of branched chain amino acid catabolism

I. Antanaviciute, V. Mikalayeva, I. Cesleviciene et al
Scientific Reports. Vol. 7 (1), p. Article no 7820 -
Artikel i vetenskaplig tidskrift
2015

Controllability analysis of transcriptional regulatory networks reveals circular control patterns among transcription factors

Tobias Österlund, Sergio Velasco, Jens B Nielsen
Integrative Biology (United Kingdom). Vol. 7 (5), p. 560-568
Artikel i vetenskaplig tidskrift
2015

Non-small cell lung cancer is characterized by dramatic changes in phospholipid profiles

E. Marien, M. Meister, T. Muley et al
International Journal of Cancer. Vol. 137 (7), p. 1539-1548
Artikel i vetenskaplig tidskrift
2014

Gcn4p and the Crabtree effect of yeast: drawing the causal model of the Crabtree effect in Saccharomyces cerevisiae and explaining evolutionary trade-offs of adaptation to galactose through systems biology

Jose Luis Martinez Ruiz, Sergio Velasco, Kuk-ki Hong et al
FEMS Yeast Research. Vol. 14 (4), p. 654-662
Artikel i vetenskaplig tidskrift
2014

Genome-Scale Metabolic Models: A Link between Bioinformatics and Systems Biology

Jens B Nielsen, Sergio Velasco, Intawat Nookaew
Comprehensive Biomedical Physics, p. 165-173
Kapitel i bok
2013

Genome-Scale Modeling of the Protein Secretory Machinery in Yeast

Amir Feizi, Tobias Österlund, Dina Petranovic Nielsen et al
PLoS ONE. Vol. 8 (5)
Artikel i vetenskaplig tidskrift
2013

Mapping condition-dependent regulation of metabolism in yeast through genome-scale modeling

Tobias Österlund, Intawat Nookaew, Sergio Velasco et al
BMC Systems Biology. Vol. 7
Artikel i vetenskaplig tidskrift
2013

Understanding the interactions between bacteria in the human gut through metabolic modeling

Saeed Shoaie, Fredrik Karlsson, Adil Mardinoglu et al
Scientific Reports. Vol. 3
Artikel i vetenskaplig tidskrift
2013

Experimental evidence suggests the existence of evolutionary conserved global operation principles governing microbial metabolism

Sergio Velasco
Scientific Reports. Vol. 3, p. 3017-
Artikel i vetenskaplig tidskrift
2013

Mapping global effects of the anti-sigma factor MucA in Pseudomonas fluorescens SBW25 through genome-scale metabolic modeling

S. Borgos, Sergio Velasco, H. Sletta et al
BMC Systems Biology. Vol. 7
Artikel i vetenskaplig tidskrift
2013

A community-driven global reconstruction of human metabolism

I. Thiele, N. Swainston, R. M. T. Fleming et al
Nature Biotechnology. Vol. 31 (5), p. 419-+
Artikel i vetenskaplig tidskrift
2013

Metabolic and protein interaction sub-networks controlling the proliferation rate of cancer cells and their impact on patient survival

Amir Feizi, Sergio Velasco
Scientific Reports. Vol. 3
Artikel i vetenskaplig tidskrift
2012

Dynamic (13) C-labelling experiments prove important differences in protein turnover rate between two Saccharomyces cerevisiae strains

Kuk-ki Hong, Jin Hou, Saeed Shoaie et al
FEMS Yeast Research. Vol. 12 (7), p. 741-747
Artikel i vetenskaplig tidskrift
2012

Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT

Rasmus Ågren, Sergio Velasco, Adil Mardinoglu et al
PLoS Computational Biology (5)
Artikel i vetenskaplig tidskrift
2011

Modeling of VOC mass transfer in two-liquid phase stirred tank, biotrickling filter and airlift reactors

M. Hernandez, G. Quijano, R. Munoz et al
Chemical Engineering Journal. Vol. 172 (2-3), p. 961-969
Artikel i vetenskaplig tidskrift
2011

Non-equilibrium statistical mechanics: partition functions and steepest entropy increase

Sergio Velasco
Journal of Statistical Mechanics: Theory and Experiment (5)
Artikel i vetenskaplig tidskrift
2011

Mathematical models of cell factories: moving towards the core of industrial biotechnology

Marija Cvijovic, Sergio Velasco, Jens B Nielsen
Microbial Biotechnology. Vol. 4 (5), p. 572-584
Artikel i vetenskaplig tidskrift
2011

A metabolic network of a phosphate-accumulating organism provides new insights into enhanced biological phosphorous removal

Sergio Velasco
Water Science and Technology. Vol. 64 (12), p. 2410-2416
Artikel i vetenskaplig tidskrift
2011

Codon usage variability determines the correlation between proteome and transcriptome fold changes

Roberto Olivares Hernandez, Sergio Velasco, Jens B Nielsen
BMC Systems Biology. Vol. 5
Artikel i vetenskaplig tidskrift
2010

Modelling gas-liquid VOCs transport in two-liquid phase partitioning bioreactors

Sergio Velasco, M. Hernandez, S. Villaverde et al
International Journal of Heat and Mass Transfer. Vol. 53 (5-6), p. 1139-1145
Artikel i vetenskaplig tidskrift
2010

Identification of flux control in metabolic networks using non-equilibrium thermodynamics

Sergio Velasco, Jens B Nielsen
Metabolic Engineering. Vol. 12 (4), p. 369-377
Artikel i vetenskaplig tidskrift
2010

Sampling the Solution Space in Genome-Scale Metabolic Networks Reveals Transcriptional Regulation in Key Enzymes

Sergio Velasco, Rasmus Ågren, Jens B Nielsen
PLoS Computational Biology. Vol. 6 (7), p. 16-
Artikel i vetenskaplig tidskrift
2010

Steepest entropy increase is justified by information theory. The relations between Ziegler's principle, Onsager's formalism and Prigogine's principle

Sergio Velasco
Physica A: Statistical Mechanics and its Applications. Vol. 389 (21), p. 4564-4570
Artikel i vetenskaplig tidskrift
2010

Use of genome-scale metabolic models for understanding microbial physiology

Liming Liu, Rasmus Ågren, Sergio Velasco et al
FEBS Letters. Vol. 584 (12), p. 2556-2564
Artikel i vetenskaplig tidskrift
2009

Mechanistic Model for the Reclamation of Industrial Wastewaters Using Algal-Bacterial Photobioreactors

Sergio Velasco, B. Guieysse, R. Munoz
Environmental Science & Technology. Vol. 43 (9), p. 3200-3207
Artikel i vetenskaplig tidskrift
2009

Random sampling of metabolic networks

Sergio Velasco, Jens B Nielsen
New Biotechnology. Vol. 25 (Suppl. 1 Published: SEP 2009 ; Meeting abstract), p. S336-S336
Artikel i vetenskaplig tidskrift

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