Vilhelm Müller

Publications (23)
Projects (0)

Showing 23 publications

2024

Photophysical image analysis: Unsupervised probabilistic thresholding for images from electron-multiplying charge-coupled devices

Jens Krog, Albertas Dvirnas, Oskar E. Ström et al

PLoS ONE. Vol. 19 (4 April)

Journal article

Show project

2023

Strain-level bacterial typing directly from patient samples using optical DNA mapping

My Nyblom, Anna Johnning, Karolin Frykholm et al

Communications Medicine. Vol. 3 (31)

Journal article

2022

DNA in Nanochannels - Theory and Applications

Karolin Frykholm, Vilhelm Müller, Sriram Kesarimangalam et al

Quarterly Reviews of Biophysics. Vol. 55

Review article

2021

Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach

Albertas Dvirnas, Callum L. Stewart, Vilhelm Müller et al

PLoS ONE. Vol. 16 (11 November)

Journal article

2020

Cultivation-Free Typing of Bacteria Using Optical DNA Mapping

Vilhelm Müller, My Nyblom, Anna Johnning et al

ACS Infectious Diseases. Vol. 6 (5), p. 1076-1084

Journal article

2020

Competitive-Binding Based Optical DNA Mapping - From Bacterial Plasmids to the Human Genome

Vilhelm Müller

Doctoral thesis

2019

Developing an optical DNA mapping toolbox to identify chromosomal translocations in acute myeloid leukemia

Miriam Hitz, Gaurav Goyal, Vilhelm Müller et al

23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2019, p. 626-627

Paper in proceeding

2019

Enzyme-free optical DNA mapping of the human genome using competitive binding

Vilhelm Müller, Albertas Dvirnas, John Andersson et al

Nucleic Acids Research. Vol. 47 (15)

Journal article

2019

Bacterial identification by optical mapping of genomic DNA in nanofluidic channels

My Nyblom, Vilhelm Müller, Anna Johnning et al

23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2019, p. 821-822

Paper in proceeding

2019

Optical DNA Mapping Combined with Cas9-Targeted Resistance Gene Identification for Rapid Tracking of Resistance Plasmids in a Neonatal Intensive Care Unit Outbreak

Santosh Kumar Bikarolla, Viveka Nordberg, Fredrika Rajer et al

mBio. Vol. 10 (4)

Journal article

2019

Interspecies plasmid transfer appears rare in sequential infections with extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae

Anna Lindblom, Sriram Kesarimangalam, Vilhelm Müller et al

Diagnostic Microbiology and Infectious Disease. Vol. 93 (4), p. 380-385

Journal article

2018

Facilitated sequence assembly using densely labeled optical DNA barcodes: A combinatorial auction approach

Albertas Dvirnas, C. Pichler, Callum L. Stewart et al

PLoS ONE. Vol. 13 (3)

Journal article

2018

The resistomes of six carbapenem-resistant pathogens - a critical genotype-phenotype analysis

Anna Johnning, N. Karami, Erika Tång Hallbäck et al

Microbial Genomics. Vol. 4 (11)

Journal article

2018

Identification of pathogenic bacteria in complex samples using a smartphone based fluorescence microscope

Vilhelm Müller, José M. Sousa, Hatice Ceylan Koydemir et al

RSC Advances. Vol. 8 (64), p. 36493-36502

Journal article

2017

Optical DNA mapping in nanofluidic devices: principles and applications

Vilhelm Müller, Fredrik Westerlund

Lab on a Chip - Miniaturisation for Chemistry and Biology. Vol. 17 (4), p. 579-590

Journal article

2017

Optical Mapping of Bacterial Plasmids

Vilhelm Müller

Licentiate thesis

2017

Noise reduction in single time frame optical DNA maps

P. C. Torche, Vilhelm Müller, Fredrik Westerlund et al

PLoS ONE. Vol. 12 (6), p. Article no. e0179041 -

Journal article

2016

Rapid Tracing of Resistance Plasmids in a Nosocomial Outbreak Using Optical DNA Mapping

Vilhelm Müller, N. Karami, Lena Nyberg et al

ACS Infectious Diseases. Vol. 2 (5), p. 322-328

Journal article

2016

Direct identification of antibiotic resistance genes on single plasmid molecules using CRISPR/Cas9 in combination with optical DNA mapping.

Vilhelm Müller, Fredrika Rajer, Karolin Frykholm et al

Scientific Reports. Vol. 6, p. 37938-

Journal article

2016

Detailed characterization of plasmids carrying resistance genes using optical DNA mapping

Vilhelm Müller, Lena Nyberg, Mahmood Saair Quaderi et al

20th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2016, p. 1561-1562

Paper in proceeding

2016

Rapid identification of intact bacterial resistance plasmids via optical mapping of single DNA molecules

Lena Nyberg, Mahmood Saair Quaderi, Gustav Emilsson et al

Scientific Reports. Vol. 6

Journal article

2015

Extension of nanoconfined DNA: quantitative comparison between experiment and theory

Vitalii Iarko, Erik Werner, Lena Nyberg et al

Physical Review E. Vol. 92 (6), p. Art. Nr. 062701-

Journal article

2013

Enantioselective Cyclization of Photochromic Dithienylethenes Bound to DNA

Tamara Pace, Vilhelm Müller, Shiming Li et al

Angewandte Chemie - International Edition. Vol. 52 (16), p. 4393-4396

Journal article

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