Yu Chen

Post doc at Systems and Synthetic Biology
Image of Yu Chen

Showing 12 publications

2021

Mathematical modeling of proteome constraints within metabolism

Yu Chen, Jens B Nielsen
Current Opinion in Systems Biology. Vol. 25, p. 50-56
Review article
2021

Yeast optimizes metal utilization based on metabolic network and enzyme kinetics

Yu Chen, Feiran Li, Jiwei Mao et al
Proceedings of the National Academy of Sciences of the United States of America. Vol. 118 (12)
Journal article
2021

In vitro turnover numbers do not reflect in vivo activities of yeast enzymes

Yu Chen, Jens B Nielsen
Proceedings of the National Academy of Sciences of the United States of America. Vol. 118 (32)
Journal article
2021

Engineering yeast metabolism for the discovery and production of polyamines and polyamine analogues

Jiufu Qin, Anastasia Krivoruchko, Boyang Ji et al
Nature Catalysis. Vol. 4 (6), p. 498-509
Journal article
2021

Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments

Yu Chen, Eunice van Pelt-KleinJan, Berdien van Olst et al
Molecular Systems Biology. Vol. 17 (4)
Journal article
2020

Genome-scale modeling for Bacillus coagulans to understand the metabolic characteristics

Yu Chen, Yan Sun, Zhihao Liu et al
Biotechnology and Bioengineering. Vol. 117 (11), p. 3545-3558
Journal article
2020

Combining mechanistic and machine learning models for predictive engineering and optimization of tryptophan metabolism

J. Zhang, Søren D. Petersen, Tijana Radivojevic et al
Nature Communications. Vol. 11 (1)
Journal article
2019

Energy metabolism controls phenotypes by protein efficiency and allocation

Yu Chen, Jens B Nielsen
Proceedings of the National Academy of Sciences of the United States of America. Vol. 116 (35), p. 17592-17597
Journal article
2019

Genome-Scale Metabolic Modeling from Yeast to Human Cell Models of Complex Diseases: Latest Advances and Challenges

Yu Chen, Gang Li, Jens B Nielsen
Methods in Molecular Biology, p. 329-345
Book chapter
2019

Rewiring carbon metabolism in yeast for high level production of aromatic chemicals

Quanli Liu, Tao Yu, Xiaowei Li et al
Nature Communications. Vol. 10 (1)
Journal article
2017

Systematic inference of functional phosphorylation events in yeast metabolism

Yu Chen, Y. H. Wang, Jens B Nielsen
Bioinformatics. Vol. 33 (13), p. 1995-2001
Journal article
2016

Flux control through protein phosphorylation in yeast

Yu Chen, Jens B Nielsen
FEMS Yeast Research. Vol. 16 (8)
Journal article

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