Philip Gerlee

Forskarassistent at Chalmers, Mathematical Sciences, Applied Mathematics and Statistics

Projects

2014–2019

Hierarchical mixed effects modelling of dynamical systems

Bernt Wennberg Mathematical Sciences
Martin Adiels Mathematics
Philip Gerlee Applied Mathematics and Statistics
Torbjörn Lundh Applied Mathematics and Statistics
Swedish Foundation for Strategic Research (SSF)

2015–2018

Extension of homogenisation techniques for multicellular systems

Philip Gerlee Applied Mathematics and Statistics
Swedish Research Council (VR)

There might be more projects where Philip Gerlee participates, but you have to be logged in as a Chalmers employee to see them.

Publications

2017

The Influence of Cellular Characteristics on the Evolution of Shape Homeostasis

Philip Gerlee, D. Basanta, A. R. A. Anderson et al
Artificial Life. Vol. 23 (3), p. 424-448
Scientific journal article - peer reviewed
2016

Scientific Models

Philip Gerlee, Torbjörn Lundh,
Monograph, book
2016

Estimating the probability of coexistence in cross-feeding communities

Björn Vessman, Philip Gerlee, Torbjörn Lundh et al
Journal of Theoretical Biology. Vol. 408 (7), p. 13-21
Scientific journal article - peer reviewed
2016

Travelling wave analysis of a mathematical model of glioblastoma growth

Philip Gerlee, Sven Nelander,
Mathematical Biosciences. Vol. 276, p. 75-81
Scientific journal article - peer reviewed
2015

Bridging scales in cancer progression: Mapping genotype to phenotype using neural networks

Philip Gerlee, Eunjung Kim, Alexander Anderson et al
Seminars in Cancer Biology. Vol. 30, p. 30-41
Scientific journal article - peer reviewed
2015

The evolution of carrying capacity in constrained and expanding tumour cell populations

Philip Gerlee, A. R. A. Anderson,
Physical Biology. Vol. 12 (5), p. artikel nr 056001
Scientific journal article - peer reviewed
2015

Complexity and stability in growing cancer cell populations

Philip Gerlee, P. M. Altrock,
Proceedings of the National Academy of Sciences of the United States of America. Vol. 112 (21), p. E2742-E2743
Scientific journal article - non peer reviewed
2014

A filter-flow perspective of haematogenous metastasis offers a non-genetic paradigm for personalised cancer therapy

Jacob G Scott, Alexander G Fletcher, Philip K Maini et al
European Journal of Cancer. Vol. 50 (17), p. 3068–3075
Scientific journal article - peer reviewed
2013

Mathematical modeling of the metastatic process

J.G. Scott, Philip Gerlee, D. Basanta et al
Experimental Metastasis: Modeling and Analysis
Chapter in monograph, book
2013

Comparative drug pair screening across multiple glioblastoma cell lines reveals novel drug-drug interactions

L. Schmidt, T. Kling, N. Monsefi et al
Neuro-Oncology. Vol. 15 (11), p. 1469-1478
Scientific journal article - peer reviewed
2013

Searching for Synergies: Matrix Algebraic Approaches for Efficient Pair Screening

Philip Gerlee, Linnéa Schmidt, Naser Monsefi et al
PLoS ONE. Vol. 8 (7), p. Art. no. e68598
Scientific journal article - peer reviewed
2013

Cross-Feeding Dynamics Described by a Series Expansion of the Replicator Equation

Torbjörn Lundh, Philip Gerlee,
Bulletin of Mathematical Biology. Vol. 75 (5), p. 709-724
Scientific journal article - peer reviewed
2013

The Model Muddle: In Search of Tumor Growth Laws

Philip Gerlee,
Cancer Research. Vol. 73 (8), p. 2407-2411
Scientific journal article - peer reviewed
2013

A mathematical model of tumour self-seeding reveals secondary metastatic deposits as drivers of primary tumour growth

J. G. Scott, D. Basanta, A. R. A. Anderson et al
Journal of the Royal Society Interface. Vol. 10 (82), p. Art. no. 20130011
Scientific journal article - peer reviewed
2012

Vetenskapliga modeller

Philip Gerlee, Torbjörn Lundh,
Monograph, book - popular science
2012

The Impact of Phenotypic Switching on Glioblastoma Growth and Invasion

Philip Gerlee, Sven Nelander,
PLoS Computational Biology. Vol. 8 (6)
Scientific journal article - peer reviewed
2012

Effect of space in the game “war of attrition”

Philip Gerlee, Torbjörn Lundh,
Physical Review E. Vol. 85 (4), p. Art. no. 041115
Scientific journal article - peer reviewed
2011

Structural correlations in bacterial metabolic networks

Sebastian Bernhardsson, Philip Gerlee, Ludvig Lizana et al
BMC Evolutionary Biology. Vol. 11 (20)
Scientific journal article - peer reviewed
2011

Evolving homeostatic tissue using genetic algorithms

Philip Gerlee, D. Basanta, A. R. A. Anderson et al
Progress in Biophysics & Molecular Biology. Vol. 106 (2), p. 414-425
Scientific journal article - peer reviewed
2010

Evolving Homeostatic Tissue Using Genetic Algorithms

Philip Gerlee, David Basanta, Alexander R A Anderson et al
Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, p. 512-514
Conference paper - peer reviewed
2010

Weak Emergence and Complexity

Henrik Thorén, Philip Gerlee,
Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, p. 879-887
Conference paper - peer reviewed
2010

Rock-scissor-paper dynamics in a digital ecology

Philip Gerlee, Torbjörn Lundh,
12th International Conference on the Synthesis and Simulation of Living Systems: Artificial Life XII, ALIFE 2010; Odense; Denmark; 19 August 2010 through 23 August 2010, p. 285-295
Conference paper - peer reviewed
2010

Evolution, regulation and disruption of homeostasis and its role in carcinogenesis

Alexander Anderson, David Basanta, Philip Gerlee et al
Multiscale Cancer Modeling, p. 384
Chapter in monograph, book
2010

Diffusion-limited tumour growth: Simulations and analysis.

Philip Gerlee, Alexander R A Anderson,
Mathematical biosciences and engineering. Vol. 7 (2), p. 385-400
Scientific journal article - peer reviewed
2010

Productivity and diversity in a cross-feeding population of digital organisms

Philip Gerlee, Torbjörn Lundh,
Evolution. Vol. 64 (9), p. 2716–2730
Scientific journal article - peer reviewed
2009

Gene divergence and pathway duplication in the metabolic network of yeast and digital organisms

Philip Gerlee, Torbjörn Lundh, B. Zhang et al
Journal of the Royal Society Interface. Vol. 6, p. 1233-1245
Scientific journal article - peer reviewed
2008

The Emergence of Overlapping Scale-free Genetic Architecture in

Philip Gerlee, Torbjörn Lundh,
Artificial Life. Vol. 14 (3), p. 265-275
Scientific journal article - peer reviewed
2005

The Genetic coding style of digital organisms

Philip Gerlee, Torbjörn Lundh,
Lecture Notes in Computer Science - Advances in Artificial Life, Sept. 2005, Canterbury, UK, M.S. Capcarrere et al.. Vol. 3630, p. 854-863
Conference paper - peer reviewed