Eduard Kerkhoven
Showing 71 publications
GotEnzymes2: expanding coverage of enzyme kinetics and thermal properties
Reconstruction of human metabolic models with large language models
Systematically exploring yeast metabolism through retrobiosynthesis and deep learning
Rewiring Saccharomyces cerevisiae metabolism for optimised Taxol® precursors production
Yeast9: a consensus genome-scale metabolic model for S. cerevisiae curated by the community
Single-cell omics analysis with genome-scale metabolic modeling
Advances in genome-scale metabolic models of industrially important fungi
Resin acids play key roles in shaping microbial communities during degradation of spruce bark
Abolishing storage lipids induces protein misfolding and stress responses in Yarrowia lipolytica
Genome-scale metabolic model of oleaginous yeast Papiliotrema laurentii
Deep learning-based k(cat) prediction enables improved enzyme-constrained model reconstruction
Multiscale models quantifying yeast physiology: towards a whole-cell model
Urea is a drop-in nitrogen source alternative to ammonium sulphate in Yarrowia lipolytica
A Pan-Draft Metabolic Model Reflects Evolutionary Diversity across 332 Yeast Species
Validated Growth Rate-Dependent Regulation of Lipid Metabolism in Yarrowia lipolytica
Reconstruction of Genome-Scale Metabolic Model for Hansenula polymorpha Using RAVEN
Adaptations in metabolism and protein translation give rise to the Crabtree effect in yeast
Proteome Constraints in Genome-Scale Models
Yeast metabolic innovations emerged via expanded metabolic network and gene positive selection
The yeastGemMap: A process diagram to assist yeast systems-metabolic studies
Editorial: Multi-Omics Technologies for Optimizing Synthetic Biomanufacturing
C/N ratio and carbon source-dependent lipid production profiling in Rhodotorula toruloides
Extracting novel hypotheses and findings from RNA-seq data
Nitrogen as the major factor influencing gene expression in Yarrowia lipolytica
Proteome analysis of xylose metabolism in Rhodotorula toruloides during lipid production
Genome-scale model of Rhodotorula toruloides metabolism
Regulation of yeast-to-hyphae transition in Yarrowia lipolytica
Barriers and opportunities in bio-based production of hydrocarbons
Advancing metabolic engineering of Yarrowia lipolytica using the CRISPR/Cas system
Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica
A molecular genetic toolbox for Yarrowia lipolytica
Regulation of amino-acid metabolism controls flux to lipid accumulation in yarrowia lipolytica
Applications of computational modeling in metabolic engineering of yeast
TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei
Genome Scale Metabolic Modeling of the Riboflavin Overproducer Ashbya gossypii
Trypanosoma brucei: meet the system
The Silicon Trypanosome: A Test Case of Iterative Model Extension in Systems Biology
Handling Uncertainty in Dynamic Models: The Pentose Phosphate Pathway in Trypanosoma brucei
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Showing 10 research projects
Understanding and Postponing Yeast Death to Improve Production (UPsYDe)
Sustainable biometallurgical battery recycling
Awakening of cryptic biosynthetic gene clusters using obese red yeast
Optimera mikrobiell tillverkning av itakonat för hållbar plast och tvättmedel
Engineering a robust biocatalyst for sustainable biofuel production
From electricity towards biodiesel production in yeast
Systematic Rebuilding of Actinomycetes for Natural Product Formation (ERASysAPP - SYSTERACT)