Vladimir Zhdanov

2024

Kinetics of the formation of core–shell structures under transient external conditions

2023

Ionizable lipids in bio-inspired nanocarriers

2023

Release of molecules from nanocarriers

2023

Simulation of reduction of oxidized metal nanoparticles

2023

Label-free quantification of protein binding to lipid vesicles using transparent waveguide evanescent-field scattering microscopy with liquid control

2023

Basics of the LSPR Sensors for Soft Matter at Interfaces

2023

Catalytic Conversion of Hydrocarbons and Formation of Carbon Nanofilaments in Porous Pellets

2023

Extracellular interplay of amyloid fibrils and neural cells

pH-Modulated Nanoarchitectonics for Enhancement of Multivalency-Induced Vesicle Shape Deformation at Receptor-Presenting Lipid Membrane Interfaces

Unification: Viscosity, permittivity, and hydration forces near an interface

2022

Kinetics and percolation: coke in heterogeneous catalysts

2022

Lipid nanoparticles with ionizable lipids: Statistical aspects

2022

Diffusion-limited association of nanoparticles in fluid: Beyond the no-slip boundary conditions

2022

Dissimilar Deformation of Fluid- and Gel-Phase Liposomes upon Multivalent Interaction with Cell Membrane Mimics Revealed Using Dual-Wavelength Surface Plasmon Resonance

2022

Interaction Kinetics of Individual mRNA-Containing Lipid Nanoparticles with an Endosomal Membrane Mimic: Dependence on pH, Protein Corona Formation, and Lipoprotein Depletion

Comment on "Real-time atomistic simulation of the Ostwald ripening of TiO2 supported Au nanoparticles" by B. Zhu, R. Qi, L. Yuan and Y. Gao, Nanoscale, 2020, 12, 19142

Late stage of the formation of a protein corona around nanoparticles in biofluids

Unraveling How Cholesterol Affects Multivalency-Induced Membrane Deformation of Sub-100 nm Lipid Vesicles

2022

Time-Resolved Thickness and Shape-Change Quantification using a Dual-Band Nanoplasmonic Ruler with Sub-Nanometer Resolution

2021

Grain-growth mediated hydrogen sorption kinetics and compensation effect in single Pd nanoparticles

2021

Time-Resolved and Label-Free Evanescent Light-Scattering Microscopy for Mass Quantification of Protein Binding to Single Lipid Vesicles

2021

How nanoparticles can induce dimerization and aggregation of cells in blood or lymph

2021

Diffusion of Lipid Nanovesicles Bound to a Lipid Membrane Is Associated with the Partial-Slip Boundary Condition

2021

Partial or complete suppression of hysteresis in hydride formation in binary alloys of Pd with other metals

2021

Virology from the perspective of theoretical colloid and interface science

2021

Nanocrystallites, adsorption, surface tension, and Wulff rule

2021

Determination of Nanosized Adsorbate Mass in Solution Using Mechanical Resonators: Elimination of the so Far Inseparable Liquid Contribution

2021

Manifestation of Onsager's off-diagonal fluxes in diffusion of coadsorbed particles

2021

Kinetic aspects of virus targeting by nanoparticles in vivo

2020

Suppression of hysteresis in absorption of hydrogen by a Pd-Au alloy

Two-dimensional Ostwald ripening with irreversible absorption or reaction on boundaries

Vacuum field in a cavity, light-mediated vibrational coupling, and chemical reactivity

Kinetic aspects of the interplay of cancer and the immune system

2020

Kinetics of Reaction on a Single Catalytic Particle in a Fluidic Nanochannel

2020

Single-vesicle imaging reveals lipid-selective and stepwise membrane disruption by monomeric α-synuclein

2020

Virions and respiratory droplets in air: Diffusion, drift, and contact with the epithelium

2020

Simulations of oxidation of metal nanoparticles with a grain boundary inside

Ostwald ripening on a composite support

2020

How the partial-slip boundary condition can influence the interpretation of the DLS and NTA data

2020

Ligand-receptor-mediated attachment of lipid vesicles to a supported lipid bilayer

Analysis of the initiation of viral infection under flow conditions with applications to transmission in feed

Competitive multivalent coadsorption and desorption of biological nanoparticles on a supported lipid bilayer

Kinetic model of oxidation of metal nanoparticles: Cabrera-Mott and Kirkendall effects

2019

Nanoparticles without and with protein corona: van der Waals and hydration interaction

Intracellular RNA delivery by lipid nanoparticles: Diffusion, degradation, and release

Relaxation of a dislocation in a nanocrystallite

2019

Spatio-temporal aspects of the interplay of cancer and the immune system

Kirkendall effect in the two-dimensional lattice-gas model

2019

Heterodimers for in Situ Plasmonic Spectroscopy: Cu Nanoparticle Oxidation Kinetics, Kirkendall Effect, and Compensation in the Arrhenius Parameters

Competition for membrane receptors: Norovirus detachment via lectin attachment

Formation of a protein corona around nanoparticles

Slow relaxation during and after perturbation of bistable kinetics of gene expression

2019

Metal–polymer hybrid nanomaterials for plasmonic ultrafast hydrogen detection

Global diffusion limitations during the initial phase of the formation of a protein corona around nanoparticles

Quantitative Detection of Biological Nanoparticles in Solution via Their Mediation of Colocalization of Fluorescent Liposomes

Single-Molecule Detection with Lightguiding Nanowires: Determination of Protein Concentration and Diffusivity in Supported Lipid Bilayers

Pulling-induced rupture of ligand-receptor bonds between a spherically shaped bionanoparticle and the support

mRNA function after intracellular delivery and release

Membrane Deformation Induces Clustering of Norovirus Bound to Glycosphingolipids in a Supported Cell-Membrane Mimic

2018

Universal Scaling and Design Rules of Hydrogen-Induced Optical Properties in Pd and Pd-Alloy Nanoparticles

Intracellular miRNA or siRNA delivery and function

Spatiotemporal Kinetics of Supported Lipid Bilayer Formation on Glass via Vesicle Adsorption and Rupture

Proliferation of cells with aggregation and communication

2017

Detachment of Membrane Bound Virions by Competitive Ligand Binding Induced Receptor Depletion

Interpretation of amperometric kinetics of content release during contacts of vesicles with a lipid membrane

Mathematical aspects of the regulation of gene transcription by promoters

2017

Metal dimer sites in ZSM-5 zeolite for methane-to-methanol conversion from first-principles kinetic modelling: is the [Cu-O-Cu]2+ motif relevant for Ni, Co, Fe, Ag, and Au?

Charge transfer between sensing and targeted metal nanoparticles in indirect nanoplasmonic sensors

2017

Grain boundary mediated hydriding phase transformations in individual polycrystalline metal nanoparticles

Kinetics of lipid-nanoparticle-mediated intracellular mRNA delivery and function

Oxidation of metal nanoparticles with the grain growth in the oxide

2017

Multivalent ligand-receptor-mediated interaction of small filled vesicles with a cellular membrane

Nanoparticles in a nanochannel: Van der Waals interaction and diffusion

A generic statistical model of hydride formation in a random alloy

Dual-Wavelength Surface Plasmon Resonance for Determining the Size and Concentration of Sub-Populations of Extracellular Vesicles

Mathematical aspects of the kinetics of formation and degradation of linear peptide or protein aggregates

Hydride formation in core-shell alloyed metal nanoparticles

Diffusion-limited attachment of nanoparticles to flexible membrane-immobilized receptors

2016

Two-dimensional flow nanometry of biological nanoparticles for accurate determination of their size and emission intensity

Kinetics of enzyme-mediated hydrolysis of lipid vesicles

Kinetic aspects of enzyme-mediated repair of DNA single-strand breaks

Quantification of Multivalent Interactions by Tracking Single Biological Nanoparticle Mobility on a Lipid Membrane

Two-dimensional Ostwald ripening on a patterned support and in a mixed overlayer

Nonspecific Colloidal-Type Interaction Explains Size-Dependent Specific Binding of Membrane-Targeted Nanoparticles

Diffusion-limited attachment of large spherical particles to flexible membrane-immobilized receptors

2015

Total internal reflection fluorescence microscopy for determination of size of individual immobilized vesicles: Theory and experiment

Liquid in a tube oscillating along its axis

Control of tissue growth by locally produced activator: Liver regeneration

Kinetics of single-enzyme reactions on vesicles: Role of substrate aggregation

2015

Note: The effect of viscosity on the rate of diffusion-limited association of nanoparticles

2015

Kinetics of virus entry by endocytosis

Ostwald ripening of supported Pt nanoclusters with initial size-selected distributions

Evanescent Light-Scattering Microscopy for Label-Free Interfacial Imaging: From Single Sub-100 nm Vesicles to Live Cells

Hydride formation thermodynamics and hysteresis in individual Pd nanocrystals with different size and shape

Unravelling the Dependence of Hydrogen Oxidation Kinetics on the Size of Pt Nanoparticles by in Operando Nanoplasmonic Temperature Sensing

Interaction of Virus-Like Particles with Vesicles Containing Glycolipids: Kinetics of Detachment

Kinetics of enzymatic reactions in lipid membranes containing domains

Hydrolysis of a Lipid Membrane by Single Enzyme Molecules: Accurate Determination of Kinetic Parameters.

Ostwald ripening of charged supported metal nanoparticles: Schottky model

Mechanism of rupture of single adsorbed vesicles

Transient Bimodal Particle Size Distributions during Pt Sintering on Alumina and Silica

Kinetic models of CO oxidation on gold nanoparticles

2014

Thermodynamics of hydride formation and decomposition in supported sub-10 nm Pd nanoparticles of different sizes

Potential profiles near the nano-patterned semiconductor-electrolyte interface

2014

Viral capsids: Kinetics of assembly under transient conditions and kinetics of disassembly

A Neuron Model Including Gene Expression: Bistability, Long-Term Memory, etc

2014

Localized mRNA translation and protein association

Determination of exosome concentration in solution using surface plasmon resonance spectroscopy.

Interaction of amphipathic alpha-helical peptides with a lipid membrane: Adsorption and pore formation

Single lipid vesicle assay for characterizing single-enzyme kinetics of phospholipid hydrolysis in a complex biological fluid.

2013

Nucleation in mesoscopic systems under transient conditions: Peptide-induced pore formation in vesicles

Diffusion of adsorbed particles with attractive lateral interactions at low temperature

Three generic bistable scenarios of the interplay of voltage pulses and gene expression in neurons

2013

Two novel aspects of the kinetics of gene expression including miRNAs

Physical aspects of the initial phase of endocytosis

Simulation of the catalytic oxidation of soot

2013

Kinetics of the maintenance of the epidermis

Diffusion and adsorption of dye molecules in mesoporous TiO2 photoelectrodes studied by indirect nanoplasmonic sensing

Real time indirect nanoplasmonic in situ spectroscopy of catalyst nanoparticle sintering

Interaction of virions with membrane glycolipids

Asymmetric Hysteresis in Nanoscopic Single-Metal Hydrides: Palladium Nanorings

Periodic perturbation of genetic oscillations

Kinetic model of HIV infection including hematopoietic progenitor cells

Single Vesicle Analysis Reveals Nanoscale Membrane Curvature Selective Pore Formation in Lipid Membranes by an Antiviral α-Helical Peptide

Neural networks including microRNAs

Photo-induced chemical processes on metal-semiconductor-metal nanostructures

Kinetics of the enzyme-vesicle interaction including the formation of rafts and membrane strain

Plasmonics: Heat transfer between metal nanoparticles and supporting nanolayers

2012

Comment on "Mechanochemical Continuum Modeling of Nanovoid Nucleation and Growth in Reacting Nanoparticles"

2012

A generic 3D kinetic model of gene expression

2012

Inhibition of the receptor-mediated virion attachment to a lipid membrane

2012

Cabrera-Mott kinetics of oxidation of metal nanowires

Novel aspects of Ostwald ripening of supported metal nanoparticles

Potential profiles near the Schottky nanocontacts

Growth and global gene expression of eucaryotic cells

Interplay of viral miRNAs and host mRNAs and proteins

2011

Effect of lattice strain on hydrogen diffusion in Pd: A density functional theory study

Kinetics of Cell-to-Cell Spread of Viruses.

Kinetic models of the interference of gene transcription to ncRNA and mRNA

2011

Interaction of Single Viruslike Particles with Vesicles Containing Glycosphingolipids

A kinetic model of standard selective catalytic reduction of NO by NH3 on single sites

Periodic perturbation of the bistable kinetics of gene expression

Non-coding RNAs and complex distributed genetic networks

From sticking to slipping conditions in QCM-D

Kinetic models of gene expression including non-coding RNAs

Operando indirect nanoplasmonic spectroscopy of catalyst sintering and deactivation

Dissolution and redeposition on Pt nanoparticles under electrochemical conditions

Are the complex distributed genetic networks inherently oscillatory and chaotic?

A kinetic model of standard selective catalytic reduction of NO by NH3 on two sites

Apparent kinetics of hydriding and dehydriding of metal nanoparticles

ncRNA-mediated bistability in the synthesis of hundreds of distinct mRNAs and proteins

LSPR study of the kinetics of the liquid-solid phase transition in Sn nanoparticles

Size-dependent hysteresis in the formation and decomposition of hydride in metal nanoparticles

Interplay of Noncoding RNAs, mRNAs, and Proteins during the Growth of Eukaryotic Cells

Protein adsorption and desorption on lipid bilayers

Overheating and undercooling during melting and crystallization of metal nanoparticles

Effect of non-coding RNA on bistability and oscillations in the mRNA-protein interplay

Stochastic Bursts in the Kinetics of Gene Expression with Regulation by Long Non-Coding RNAs

2010

Size-Dependent Kinetics of Hydriding and Dehydriding of Pd Nanoparticles

Effect of lattice strain on the kinetics of hydride formation in metal nanoparticles

Simulation of dissociation of DNA duplexes attached to the surface

Hierarchical genetic networks and noncoding RNAs

Non-coding RNAs and a layered architecture of genetic networks

On the use of metal nanoparticles for enhancement of light absorption in dye-sensitized solar cells

Adsorption of proteins on a lipid bilayer

Mass transport on composite catalytic surfaces

The formation of a new phase in nanoparticles

Effect of lattice strain on the dehydriding kinetics in nanoparticles

Oscillatory kinetics of gene expression: Protein conversion and slow mRNA transport

Bistability in gene transcription: Interplay of messenger RNA, protein, and nonprotein coding RNA

Interplay of bistable kinetics of gene expression during cellular growth

Kinetics of the formation of cancer metastases via induced premetastatic cancer-stem-cell niches

Model of gene transcription including the return of a RNA polymerase to the beginning of a transcriptional cycle

Feasibility of the non-coding RNA gradients in cells

Signal propagation in stem-cell niches

Diffusion-limited kinetics of adsorption of biomolecules on supported nanoparticles

On the Feasibility of Strain-Induced Formation of Hollows during Hydriding or Oxidation of Metal Nanoparticles

Conditions of appreciable influence of microRNA on a large number of target mRNAs

KINETICS OF CATALYTIC REACTIONS ON A UNIFORM SURFACE AND SINGLE SITES: SIMILARITY AND DIFFERENCE

Intracellular viral kinetics limited by the supply of amino acids for synthesis of viral proteins

Coarse-grained model of long-term supply of oil

Kinetic and thermodynamic characterization of single-mismatch discrimination using single-molecule imaging

Amplification of kinetic oscillations in gene expression

Switches in gene expression including microRNA and a large number of distinct mRNAs

Stochastic model of the formation of cancer metastases via cancer stem cells

Bifurcations in the interplay of messenger RNA, protein and nonprotein coding RNA

Kinetics of electrochemical reactions on model supported catalysts: readsorption and mass transport

Kinetics of oxidation of nm-sized soot spherules

Kinetic oscillations in the expression of messenger RNA, regulatory protein, and nonprotein coding RNA

Avrami-Kolmogorov-Johnson-Mehl kinetics for nanoparticles

Cabrera-Mott kinetics of oxidation of nm-sized metal particles

Steric constraints on adsorption in heteregeneous catalytic reactions

Interplay of master regulatory proteins and mRNA in gene expression: 3D Monte Carlo simulations

Reaction dynamics and kinetics: TST, non-equilibrium and non-adiabatic effects, lateral interaction, etc.

Simulation of proliferation and differentiation of cells in a stem-cell niche

2008

Kinetics of oxidation of nm-sized soot spherules

Kinetics of migration and coalescence of supported nm-sized metal particles

Kinetics of the formation of a new phase in nanoparticles

Simulation of processes related to H2-O2 PEM fuel cells

2007

Simulation of methane oxidation on Pt

Stochasti bistable gene transcription during the cell cycle

Effect of mRNA diffusion on stochastic bursts in gene transcription

Kintetic model of receptor-mediated adhesion of cells to a functionalized supported lipid bilayer

Stem cell proliferation and differentiation and stochastic bistability in gene expression

Controlled radial distribution of nanoscale vesicles during binding to an oscillating QCM surface

Three-dimensional Monte Carlo simulations of intracellular diffusion and reaction of signaling proteins

Lipid exchange during contact between oppositely charged lipid bilayers

Efficiency of the plasmon-mediated enhancement of photoexcitation of adsorbate on nm-sized metal particles

Effect of cell-cell communication on the kinetics of proliferation and differentiation of stem cells

Criterion for extinction of CO oxidation in a catalytic monolith

Kinetic model of HIV infection

Oscillatory kinetics of gene transcription during the cellular growth

Kinetics of electrochemical O-2 reduction on Pt

A generic model of undesired biodiversity: Temporal and spatio-temporal bifurcations

Charge distribution on and near Schottky nanocontacts

2006

Self-sustained kinetic oscillations in CO oxidation over silica-supported Pt

Adsorption and spontaneous rupture of vesicles composed of lipids of two types

Signaling between cells attached to a surface

Suppression of binding events via external perturbation with emphasis on QCM

Imaging and manipulation of adsorbed lipid vesicles by an AFM tip: Experiment and Monte Carlo simulations

Simulation of the charge and potential distribution in the double layer formed by polymer electrolyte

Grazers and grass: Monte Carlo simulations

Nonadiabatic rate processes on metal surface: Limitation by spin conversion

Transient stochastic bistable kinetics of gene transcription during the cellular growth

Two-variable periodic perturbation of kinetic oscillations

Fluctuations in kinetic oscillations on nm-sized catalyst particles

Imaging and manipulation of adsorbed lipid vesicles by an AFM tip: Experiment and Monte Carlo Simulaitons

Bistable mean-field kinetics of CO oxidation on Pt with oxide formation

Simulation of the charge and potential distribution in the double layer formed by polymer electrolyte

Signaling between cells attached to a surface

Adsorption and spontaneous rupture of vesicles composed of lipids of two types

Relaxation of plasmons in nm-sized metal particles located on or embedded in an amorphous semiconductor

Simulation of proliferation of neural stem cells on a sruface with emphasis on spatial constraints on cell division

Monte Carlo Simulation of Bifurcation in The Intracellular Viral Kinetics

Towards the understanding of the specifics of reactions in polymer-electrolyte fuel cells

Simulation of the growth and differentiation of stem cells on a heterogeneous scaffold

A Minimal Generic Model of Bacteria-Induced Intracellular Ca2+ Oscillations in Epithelial Cells

The influence of the electrolyte on the electron diffusion in mesoporous nanocrystalline TiO2

Stochastic kinetics of reproduction of virions inside a cell

Simulation of the growth of neurospheres

Periodic perturbation of the kinetics of heterogeneous catalytic reactions

From a pluripotent stem cell to an ensemble of differentiated cells: Elements of theoretical tissue engineering

Comment on "Modelling pattern formation in CO + O2 (reaction) on Pt {100}"

Specifics of substrate-mediated photo-induced chemical processes on supported nm-sized metal particles

Kinetic oscillations on nm-sized catalyst particles: NO reduction by CO on Pt

Simulations of temperature dependence of the formation of a supported lipid bilayer via vesicle adsorption

Nanometer-sized antenna for enhancement of absorption of light by due molecules

Kinetics of Protein Aggregation with Formation of Unreactive Intermediates

Bifurcation in a generic model of intracellular viral kinetics

Simulations of kinetic oscillations in the CO+O2/Pt reaction on the nm scale

Electrochemical reactions on catalyst particles with three-phase boundaries

Simulation of CO electrooxidation on nm-sized supported Pt particles: Stripping voltammetry

One of the scenarios of electrochemical oxidation of CO on single-crystal Pt surfaces

Role of Steps in the NO-CO Reaction on the (111) Surface of Noble Metals

Perturbation of period-2 oscillations in catalytic reactions accompanied by surface restructuring

Role of the field effect fluctuations in electrochemical reactions

The effect of oxide formation on bistability in CO oxidation on Pt

Bistability in catalytic reactions on the nm scale

Kinetics of electrochemical reactions: From single crystals to nm-sized supported particles

Kinetic aspects of the structure-gap problem in heterogenous catalysis

Oscillations in the NO-CO reaction on Pt(100): NO decomposition on island boundaries

Kinetic oscillations on nm-sized catalyst particles: Surface restructuring

Kinetic oscillations on nm-sized catalyst particles: oxide model

Pattern formation in the A+B2 reaction with anisotropic lateral adsorbate-adsorbate interactions

Structure gap in heterogenous cayalysis: Kinetic aspects

Heat dissipation in exothermic reactions on non-traditional supported catalyst

Coupled catalytic oscillators: Beyond the Mass-action law

Rapid bistable reactions in porous catalysts

Simulation of CO adsorption and oxidation on Pt(110)

Standing fronts in oscillatory reactions on composite catalytic surfaces

Functional surfaces for biorecognition and sensing

Simulation of the reaction kinetics on nanometer supported catalyst particles

Catalysts in the nm-regime: Manufacturing of supported model catalysts and theoretical studies of the reaction kinetics

Simulations of the kinetics of rapid reactions on supported catalyst particles

Monte Carlo simulations of catalytic kinetics on nanometer-sized particles, with diffusion over facet boundaries

Simulation of surface restructuring and oscillations in CO-NO reaction on Pt(100)

Nanofabrication of model catalysts and simulation of their reaction kinetics

Monte Carlo simulation of the kinetics of rapid reactions on nanometer catalyst particles

Non-thermal surface roughening in catalytic reactions

Diffusion-limited reaction kinetics in nanofabricated porous model catalysts

Kinetics of the 2A + B2 => 2AB reaction complicated by spatial constraints for adsorption, formation of islands, and steps

Simulation of oxygen desorption from Pt(111)

Simulation of thermal desorption from nanometer catalyst particles

Kinetics of rapid heterogenous reactions accompanied by the reshaping of supported catalyst crystallites

Surface roughening: Kinetics, adsorbate-induced effects, and manifestation in catalytic reactions

Kinetic models of oxygen supply from CeOx to active nanometer particles of three-way catalysts

Surface restructuring, thermal desorption, kinetic bistability, and chemical waves

Mechanism and kinetics of the NO-CO reaction on Rh

Kinetics of rapid heterogenous reactions on the nanometer scale