Lisbeth Olsson

2024

Effect of pH in syngas conversion to C4 & C6 acids in mixed-culture trickle bed reactors

Exploring the interplay between yeast cell membrane lipid adaptation and physiological response to acetic acid stress

2024

A unique metabolic gene cluster regulates lactose and galactose metabolism in the yeast Candida intermedia

2024

Quantifying microbial robustness in dynamic environments using microfluidic single-cell cultivation

2024

Robustness quantification of a mutant library screen revealed key genetic markers in yeast

2024

Integration of subcritical water extraction and treatment with xylanases and feruloyl esterases maximises release of feruloylated arabinoxylans from wheat bran

2024

Chain elongation in continuous microbial electrosynthesis cells: The effect of pH and precursors supply

2024

The glass transition temperature of isolated native, residual, and technical lignin

2024

Performance and robustness analysis reveals phenotypic trade-offs in yeast

2024

Excessive Ethanol Oxidation Versus Efficient Chain Elongation Processes

2024

Understanding the impact of steam pretreatment severity on cellulose ultrastructure, recalcitrance, and hydrolyzability of Norway spruce

2024

Elucidating Thermothielavioides terrestris secretome changes for improved saccharification of mild steam-pretreated spruce

The lignocellulosic biorefinery concept is sound: a commentary on Zhao et al.

2024

Integration of subcritical water extraction and treatment with xylanases and feruloyl esterases maximises release of feruloylated arabinoxylans from wheat bran

2023

Microbial robustness in bioprocesses

Regulation of lactose and galactose growth: Insights from a unique metabolic gene cluster in Candida intermedia

2023

Enzymatic debranching is a key determinant of the xylan-degrading activity of family AA9 lytic polysaccharide monooxygenases

2023

Four ways of implementing robustness quantification in strain characterisation

2023

Structural and functional investigation of a fungal member of carbohydrate esterase family 15 with potential specificity for rare xylans

2023

Investigating the role of AA9 LPMOs in enzymatic hydrolysis of differentially steam-pretreated spruce

2023

Carboxylation of sulfated cellulose nanocrystals by family AA9 lytic polysaccharide monooxygenases

2023

Arabinoxylan source and xylanase specificity influence the production of oligosaccharides with prebiotic potential

2023

ScEnSor Kit for Saccharomyces cerevisiae Engineering and Biosensor-Driven Investigation of the Intracellular Environment

2022

Real-Time Monitoring of the Yeast Intracellular State During Bioprocesses With a Toolbox of Biosensors

2022

Data mining of Saccharomyces cerevisiae mutants engineered for increased tolerance towards inhibitors in lignocellulosic hydrolysates

2022

Comparison of Six Lytic Polysaccharide Monooxygenases from Thermothielavioides terrestris Shows That Functional Variation Underlies the Multiplicity of LPMO Genes in Filamentous Fungi

2022

Directed Evolution of (R)-2-Hydroxyglutarate Dehydrogenase Improves 2-Oxoadipate Reduction by 2 Orders of Magnitude

2022

Robustness: linking strain design to viable bioprocesses

2022

Microbial robustness 101: tools and applications

2022

Quantification of Microbial Robustness in Yeast

2022

Structure-function analysis of two closely related cutinases from Thermobifida cellulosilytica

2021

Quantifying Oxidation of Cellulose-Associated Glucuronoxylan by Two Lytic Polysaccharide Monooxygenases from Neurospora crassa

2021

Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172

2021

Exploring functionality of the reverse β-oxidation pathway in Corynebacterium glutamicum for production of adipic acid

2021

Analysis of methods for quantifying yeast cell concentration in complex lignocellulosic fermentation processes

2021

The coordinated action of glucuronoyl esterase and α-glucuronidase promotes the disassembly of lignin–carbohydrate complexes

2021

Inhibition of lpmos by fermented persimmon juice

2021

Towards enhancement of gas–liquid mass transfer in bioelectrochemical systems: Validation of a robust CFD model

2021

The role of Sch9 and the V-ATPase in the adaptation response to acetic acid and the consequences for growth and chronological lifespan

2021

RNA sequencing reveals metabolic and regulatory changes leading to more robust fermentation performance during short-term adaptation of Saccharomyces cerevisiae to lignocellulosic inhibitors

LPMO enzymes for the oxidation of CNCs

2021

Molecular-dynamics-simulation-guided membrane engineering allows the increase of membrane fatty acid chain length in Saccharomyces cerevisiae

2021

Phylogenetic analysis and in-depth characterization of functionally and structurally diverse CE5 cutinases

2020

Respiratory Physiology of Lactococcus lactis in Chemostat Cultures and Its Effect on Cellular Robustness in Frozen and Freeze-Dried Starter Cultures

Conformational gating in ammonia lyases

Exploring Microbial Robustness for a Sustainable and Efficient Bioproduction

2020

Structure-function investigation of 3-methylaspartate ammonia lyase reveals substrate molecular determinants for the deamination reaction

2020

Adaptation during propagation improves Clostridium autoethanogenum tolerance towards benzene, toluene and xylenes during gas fermentation

2020

Candida intermedia CBS 141442: A novel glucose/xylose co-fermenting isolate for lignocellulosic bioethanol production

2020

The protective role of intracellular glutathione in Saccharomyces cerevisiae during lignocellulosic ethanol production

2020

Small scale screening of yeast strains enables high-throughput evaluation of performance in lignocellulose hydrolysates

2020

Nutrient-supplemented propagation of Saccharomyces cerevisiae improves its lignocellulose fermentation ability

2020

Storage and handling of pretreated lignocellulose affects the redox chemistry during subsequent enzymatic saccharification

2020

Genomic and transcriptomic analysis of Candida intermedia reveals the genetic determinants for its xylose-converting capacity

2020

Multimodular fused acetyl–feruloyl esterases from soil and gut Bacteroidetes improve xylanase depolymerization of recalcitrant biomass

2020

Biochemical evidence of both copper chelation and oxygenase activity at the histidine brace

2020

The future of self-selecting and stable fermentations

2019

Immobilization of bacterial feruloyl esterase on mesoporous silica particles and enhancement of synthetic activity by hydrophobic-modified surface

2019

Strain-dependent variance in short-term adaptation effects of two xylose-fermenting strains of Saccharomyces cerevisiae

2019

Glycosylation influences activity, stability and immobilization of the feruloyl esterase 1a from Myceliophthora thermophila

2019

Presence of galactose in precultures induces lacS and leads to short lag phase in lactose-grown Lactococcus lactis cultures

2019

CRISPR interference technology for development of more tolerant industrial yeast strains (Milan)

Wild Saccharomyces cerevisiae lipid accumulation in lignocellulosic hydrolysate

2019

Surveying of acid-tolerant thermophilic lignocellulolytic fungi in Vietnam reveals surprisingly high genetic diversity

2019

Specific xylan activity revealed for AA9 Lytic Polysaccharide Monooxygenases of the thermophilic fungus Malbranchea cinnamomea by functional characterization

2019

Structure-function analyses reveal that a glucuronoyl esterase from Teredinibacter turnerae interacts with carbohydrates and aromatic compounds

Novel AA9 LPMOs from the thermophilic fungus Thielavia terrestris LPH 172

Genomic and transcriptomic analysis of Candida intermedia reveals genes for utilization of biotechnologically important carbon sources

2019

Evolutionary engineered Candida intermedia exhibits improved xylose utilization and robustness to lignocellulose-derived inhibitors and ethanol

Understanding enzyme-substrate interactions in Carbohydrate Esterase Family 15

2019

Lignin-first biomass fractionation using a hybrid organosolv – Steam explosion pretreatment technology improves the saccharification and fermentability of spruce biomass

2018

Biochemical and structural features of diverse bacterial glucuronoyl esterases facilitating recalcitrant biomass conversion

2018

Genome sequence of Rhizomucor pusillus FCH 5.7, a thermophilic zygomycete involved in plant biomass degradation harbouring putative GH9 endoglucanases

2018

Alcohols enhance the rate of acetic acid diffusion in S. cerevisiae: biophysical mechanisms and implications for acetic acid tolerance

2018

Biobased adipic acid – The challenge of developing the production host

Split-marker recombination for efficient targeted gene deletions in Candida intermedia

Novel methods for accelerating the development of more inhibitor tolerant yeast strains for cellulosic ethanol production

2018

Feruloyl esterase immobilization in mesoporous silica particles and characterization in hydrolysis and transesterification

2018

In silico and in vitro studies of the reduction of unsaturated α,β bonds of trans-2-hexenedioic acid and 6-amino-trans-2-hexenoic acid – Important steps towards biobased production of adipic acid

Fine-tuning the stress response of Saccharomyces cerevisiae using CRISPR interference technology

2018

A comparative study of the enzymatic hydrolysis of batch organosolv-pretreated birch and spruce biomass

2018

Mannanase hydrolysis of spruce galactoglucomannan focusing on the influence of acetylation on enzymatic mannan degradation

2018

A novel hybrid organosolv: Steam explosion method for the efficient fractionation and pretreatment of birch biomass

2018

Redox processes acidify and decarboxylate steam-pretreated lignocellulosic biomass and are modulated by LPMO and catalase

Molecular docking and molecular dynamics approach for investigating α, β-reduction of enoate moieties: toward renewable production of adipic acid

DEAMINATION REACTIONS AS PART OF THE METABOLIC PATHWAY FOR THE PRODUCTION OF ADIPIC ACID

2018

Changes in lipid metabolism convey acid tolerance in Saccharomyces cerevisiae

Biochemical and structural investigation of the CE15 family: Glucuronoyl esterases acting on recalcitrant biomass

2018

The Synthetic Potential of Fungal Feruloyl Esterases: A Correlation with Current Classification Systems and Predicted Structural Properties

Molecular docking and linear interaction energy studies give insight to α, β-reduction of enoate groups in enzymes

Genomic and transcriptomic analysis of Candida intermedia reveals important genes for xylose utilization

Lipid accumulation in wild Saccharomyces cerevisiae strains and their application for biodiesel

Biochemical and structural diversity in Carbohydrate Esterase Family 15

2017

Membrane engineering of S. cerevisiae targeting sphingolipid metabolism

2017

Immobilisation on mesoporous silica and solvent rinsing improve the transesterification abilities of feruloyl esterases from Myceliophthora thermophila

2017

Engineering ammonia-lyases for lysine transformation: first steps to green production of adipic acid

Critical redox processes during enzymatic saccharification of plant biomass: Lytic polysaccharide monooxygenases at play

High gravity lignocellulose bioprocess development for ethanol and lactic acid production by multi-feed simultaneous saccharification and fermentation

Docking and molecular dynamics approach for enzyme selection for α, β-reduction of enoate moiety : toward renewable production of adipic acid

2017

Hydrolytic potential of five fungal supernatants to enhance a commercial enzyme cocktail

Bottlenecks in lignocellulosic ethanol production: xylose fermentation and cell propagation

Plasma membrane as a crucial player in acetic acid effect on yeast

2017

Adipic acid tolerance screening for potential adipic acid production hosts

2017

Characterisation of three fungal glucuronoyl esterases on glucuronic acid ester model compounds

2017

Complete genome sequences of the xylose-fermenting Candida intermedia strains CBS 141442 and PYCC 4715

Organosolv biomass pretreatment for fuel production

2017

Combined genome and transcriptome sequencing to investigate the plant cell wall degrading enzyme system in the thermophilic fungus Malbranchea cinnamomea

The function of AA9 proteins in the thermophilic fungus Malbranchea cinnamomea

2017

Toward a sustainable biorefinery using high-gravity technology

Jäst skogsavfall blir nylon

2017

Feruloyl esterases, effects of glycosylation on activity, stability and immobilization

2017

ALD5, PAD1, ATF1 and ATF2 facilitate the catabolism of coniferyl aldehyde, ferulic acid and p-coumaric acid in Saccharomyces cerevisiae

2017

Organosolv pretreatment produces an inhibitor free hydrolysate with superior fermentability at high-solids loadings

2017

Rice straw hydrolysis using secretomes from novel fungal isolates from Vietnam

2017

Genome Sequence of the Thermophilic Biomass-Degrading Fungus Malbranchea cinnamomea FCH 10.5

Critical redox processes during enzymatic saccharification of plant biomass: Lytic polysaccharide monooxygenases at play

Pretreatment of lignocellulosic Feedstocks

2016

Sphingolipids contribute to acetic acid resistance in Zygosaccharomyces bailii

Increasing the tolerance of the non-conventional yeast Candida intermedia to ethanol and lignocellulose-derived inhibitors

2016

Physiological responses to acid stress by Saccharomyces cerevisiae when applying high initial cell density

2016

A GH115 α-glucuronidase from Schizophyllum commune contributes to the synergistic enzymatic deconstruction of softwood glucuronoarabinoxylan.

2016

A coniferyl aldehyde dehydrogenase gene from Pseudomonas sp. strain HR199 enhances the conversion of coniferyl aldehyde by Saccharomyces cerevisiae

Which methods for viable yeast cell quantification can be used in lignocellulosic fermentation processes

2016

Contribution of Structural Modification to Enhanced Enzymatic Hydrolysis and 3-D Structural Analysis of Steam-Exploded Wood using X-Ray Tomography

Linking hydrolysis performance to Trichoderma reesei cellulolytic enzyme profile

A glucuronoyl esterase from Acremonium alcalophilum cleaves native lignin-carbohydrate ester bonds

2016

Visualization of structural changes in cellulosic substrates during enzymatic hydrolysis using multimodal nonlinear microscopy

Synthesis and enzymatic hydrolysis of a diaryl benzyl ester model of a lignin-carbohydrate complex (LCC)

2016

The Presence of Pretreated Lignocellulosic Solids from Birch during Saccharomyces cerevisiae Fermentations Leads to Increased Tolerance to Inhibitors - A Proteomic Study of the Effects

2016

Feruloyl esterases immobilization in mesoporous silica particles

Synthesis of antioxidants with free and immobilised fungal feruloyl esterases

2016

Effect of cultivation conditions on the structure and morphological properties of BNC biomaterials with a focus on vascular grafts

Characterization of the respiratory physiology of Lactococcus lactis for starter culture production with improved acidification capacity

In situ conversion of phenolic compounds as a tool to phenolic tolerance development by S. cerevisiae

2015

Influence of the propagation strategy for obtaining robust Saccharomyces cerevisiae cells that efficiently co-ferment xylose and glucose in lignocellulosic hydrolysates

The supramolecular structure of cellulose-rich wood pulps can be a determinative factor for enzymatic hydrolysability

Nonlinear microscopy and CP/MAS 13C-NMR as tools for studying structural changes of cellulosic substrates during enzymatic hydrolysis

Effect of oxygen on the fermentation performance of Candida intermedia: a study case for lignocellulosic bioethanol production

In situ conversion of phenolic compounds as a tool to phenolic tolerance development by S. cerevisiae

Multiple nucleophilic elbows leading to multiple active sites in a single module esterase from Sorangium cellulosum

2015

Catabolism of coniferyl aldehyde, ferulic acid and p-coumaric acid by Saccharomyces cerevisiae yields less toxic products

Membrane engineering for reduced acetic acid stress: insights from Zygosaccharomyces bailii

Multifeed simultaneous saccharification and fermentation enables high gravity submerged fermentation of lignocellulose.

2015

Novel glucuronoyl esterases for wood processing

2015

Glucuronoyl Esterase Screening and Characterization Assays Utilizing Commercially Available Benzyl Glucuronic Acid Ester

Kinetic modeling-based optimization of multi-feed simultaneous saccharification and co-fermentation of wheat straw for ethanol production

Factors affecting the viability of Saccharomyces cerevisiae in Simultaneous Saccharification and co-Fermentation of pretreated wheat straw to ethanol

2015

Feruloyl esterases: a tool for biotransformation of hemicellulose to bioactive compounds

Membrane engineering for reduced acetic acid stress: insights from Zygosaccharomyces bailii

An engineered Saccharomyces cerevisiae for cost-effective lignocellulosic bioethanol production: process performance and physiological insights

2015

Impact of the supramolecular structure of cellulose on the efficiency of enzymatic hydrolysis

2015

Deciphering the signaling mechanisms of the plant cell wall degradation machinery in Aspergillus oryzae

Scale-up of multi feed fed-batch simultaneous saccharification and co-fermentation of pretreated wheat straw to ethanol

Fungal Glucuronoyl and Feruloyl Esterases for Wood Processing and Phenolic Acid Ester/Sugar Ester Synthesis

2015

Immobilization in MPS and characterization of a FAE for hydrolysis and transesterification reactions.

2015

Short-term adaptation during propagation improves the performance of xylose-fermenting Saccharomyces cerevisiae in simultaneous saccharification and co-fermentation

What induces respiration in lactic acid bacteria? Characterization of respiratory metabolism of Lactococcus lactis in bioreactors for production of starter cultures with improved acidification capacity

2015

Feruloyl esterase immobilization in mesoporous silica: hydrolysis and transesterifications reactions.

De novo genome sequencing of the yeast Candida intermedia

Simultaneous saccharification and co-fermentation for bioethanol production using corncobs at lab, PDU and demo scales

2015

Fungal Glucuronoyl and Feruloyl Esterases for Wood Processing and Phenolic Acid Ester/Sugar Ester Synthesis

New glucuronoyl esterases for wood processing

Fundamental studies reveal membrane engineering as strain engineering target for enhanced robustness towards lignocellulose hydrolysate inhibitors.

Characterization of pulp with high enzymatic hydrolyzability

2014

The chemical nature of phenolic compounds determines their toxicity and induces distinct physiological responses in Saccharomyces cerevisiae in lignocellulosic hydrolysates

Process optimization of multi-feed SSCF

Lignocellulosic ethanol production at high-gravity: Challenges and perspectives

Evaluation of different strategies to overcome the inhibitory effects at high gravity processes using multivariate data analysis (MVDA)

Characterization of cellulose supramolecular structure using solid-state NMR

Novel process strategies lead towards efficient bioethanol production at high solid loadings

METABOLIC ENGINEERING OF Saccharomyces cerevisiae FOR PRODUCTION OF ADIPIC ACID FROM RENEWABLE SOURCES ONE ROUTE TOWARDS A BIOECONOMY

Physiological response of Saccharomyces cerevisiae to weak acids present in lignocellulosic hydrolysate

Industrial yeasts strains for biorefinery solutions: Constructing and selecting efficient barcoded xylose fermenting strains for ethanol

Characterization of a novel non-GMO yeast for future lignocellulosic bioethanol production

METABOLIC ENGINEERING OF Saccharomyces cerevisiae FOR PRODUCTION OF ADIPIC ACID FROM RENEWABLE SOURCES

2014

Enzyme production and immobilization in mesoporous materials

Bioconversion of lignocellulosic hydrolysates: Strategies to overcome the inhibitory effects at high gravity (HG) processes

Evolutionary engineered strains of Saccharomyces cerevisiae for efficient lignocellulosic bioethanol production

Kinetic modeling of multi-feed simultaneous saccharification and co-fermentation of pretreated birch to ethanol

2014

Combined substrate, enzyme and yeast feed in simultaneous saccharification and fermentation allow bioethanol production from pretreated spruce biomass at high solids loadings

ENGINEERING GLUTATHIONE BIOSYNTHESIS TO ENHANCE REDOX ROBUSTNESS OF Saccharomyces cerevisiae

Strategic screening of filamentous fungi for their production of lignocellulose degrading enzymes

Enzymes Immobilized in Mesoporous Silica: a Physical-Chemical Perspective

Comparison of strategies to overcome the inhibitory effects in high-gravity fermentation of lignocellulosic hydrolysates

TARGETING THE INTRACELLULAR REDOX STATE IN THE DEVELOPMENT OF MORE ROBUST Saccharomyces cerevisiae STRAINS FOR LIGNOCELLULOSIC BIOETHANOL PRODUCTION

Investigating the biomass modifying and degrading enzymatic toolbox of Aspergillus japonicus var aculeatus FEC 156 with quantitative proteomics and New Generation Sequencing tools

DETOXIFICATION AS A STRATEGY FOR DEVELOPING TOLERANCE IN Saccharomyces cerevisiae TO PHENOLIC COMPOUNDS

2014

Effects of temperature and glycerol and methanol-feeding profiles on the production of recombinant galactose oxidase in Pichia pastoris

Bioconversion of lignocellulosic hydrolysates: strategies to overcome the inhibitory effects at high gravity processes

Isolation and evolution of a novel non-saccharomyces xylose-fermenting strain for lignocellulosic bioethanol production

2014

Morphology and enzyme production of Trichoderma reesei Rut C-30 are affected by the physical and structural characteristics of cellulosic substrates

Yeast physiology studies and metabolic engineering for enhanced robustness

2014

Vad är ett bioraffinaderi?

Characterization and fermentation of side streams from sulfite pulping

THE INFLUENCE OF MEMBRANE COMPOSTION ON ACETIC ACID PERMEABILITY AND POTENTIALLY ACETIC ACID TOLERANCE

Conversion of lignin-derived phenolic compounds by Saccharomyces cerevisiae

Enzymatic hydrolysis of cellulose: linking hydrolyzability with cellulose characteristics

2013

Engineering glutathione biosynthesis of Saccharomyces cerevisiae increases robustness to inhibitors in pretreated lignocellulosic materials

Lipases efficiently stearate and cutinases acetylate the surface of arabinoxylan films

Biorefineries, using lignocellulosic feedstocks, will have a key role in the future bioeconomy

Sphingolipids: A potential key to acetic acid resistance in Zygosaccharomyces bailii

The Challenge of Improved Secretory Production of Active Pharmaceutical Ingredients in Saccharomyces cerevisiae: A Case Study on Human Insulin Analogs

Robust S. cerevisiae strain for next generation bio-processes: concepts and case-studies

Understanding the pH-dependent immobilization efficacy of feruloyl esterase-C on mesoporous silica and its structure activity changes

Linking growth on lignocellulosic carbon sources to gene expression through secretome analysis in novel enzyme producing filamentous fungi from Vietnamese habitats

2013

Pulsed addition of HMF and furfural to batch-grown xylose-utilizing Saccharomyces cerevisiae results in different physiological responses in glucose and xylose consumption phase

Long-Term Adaptation of Saccharomyces cerevisiae to the Burden of Recombinant Insulin Production

Investigating the biomass modifying and degrading enzymatic toolbox of Aspergillus japonicus FEC 156 with proteomics and New Generation Sequencing tools

A method to measure pH inside mesoporous particles using protein-bound SNARF1 fluorescent probe

Challenges in cellulolytic enzyme production by filamentous fungus Trichoderma reesei Rut C-30 on cellulosic materials

Screening the tropical fungal biodiversity of Vietnam for biomass modifying enzymes, with secretome and transcriptome analyses

In situ laccase treatment enhances the fermentability of steam-exploded wheat straw in SSCF processes at high dry matter consistencies

Systems biology methods and developments for Saccharomyces cerevisiae and other industrial yeasts in relation to the production of fermented food and food ingredients

Robust S. cerevisiae strain for next generation bio-processes: concepts and case-studies

Linking growth on lignocellulosic carbon sources to gene expression through secretome and transcriptome analysis in new filamentous fungi isolates from Vietnamese habitats

2013

Fed-batch SSCF using steam-exploded wheat straw at high dry matter consistencies and a xylose-fermenting Saccharomyces cerevisiae strain: effect of laccase supplementation

Bioconversion of lignocellulosic hydrolysates: Strategies to overcome the inhibitory effects at high gravity (HG) processes

Exploring the capabilities of microbial electrosynthesis during treatment of low-strength wastewater

Cellulolytic enzyme interaction with lignocellulose. Insight to factors limiting enzymatic hydrolysis

Modulating heterologous protein production in yeast: the applicability of truncated auxotrophic markers

Linking growth on lignocellulosic carbon sources to gene expression through secretome analysis in novel enzyme producing filamentous fungi from Vietnamese habitats

Molecular mechanisms behind acetic acid resistance: Insights from Zygosaccharomyces bailii

BIOCONVERSION OF LIGNOCELLULOSIC HYDROLYSATES: STRATEGIES TO OVERCOME THE INHIBITORY EFFECTS AT HIGH GRAVITY PROCESSES

2013

Viability Study of the Use of Cast Iron Open Cell Foam as Microbial Fuel Cell Electrodes

Detoxification in Saccharomyces cerevisiae under phenolics stress

QCM-D as a method for monitoring enzyme immobilization in mesoporous silica particles

2013

The influence of HMF and furfural on redox-balance and energy-state of xylose-utilizing Saccharomyces cerevisiae

Robust yeast strains as prerequisite for feasible biofuels production from renewable biomass resources

Evaluating methane and acetate production in microbial electrolysis cells: reactor performance and microbial diversity

2013

Lipidomic Profiling of Saccharomyces cerevisiae and Zygosaccharomyces bailii Reveals Critical Changes in Lipid Composition in Response to Acetic Acid Stress

Changes in the metabolism of energy reserves and gene expression during different propagation strategies of tolerant xylose fermenting yeast and its effect on the bioethanol production process

Intracellular redox state as key target for Saccharomyces cerevisiae tolerance to lignocellulosic hydrolysate inhibitors

Improvement of methane generation via coupling of anaerobic digestion to Bio-Electrochemical Systems

Screening the tropical fungal biodiversity of Vietnam for biomass modifying enzymes, with secretome and transcriptome analyses

2013

Simultaneous saccharification and co-fermentation for bioethanol production using corncobs at lab, PDU and demo scales

2013

Industrial Systems Biology of Saccharomyces cerevisiae Enables Novel Succinic Acid Cell Factory

Performance of Metal Foams as MFC Electrodes and Characterization of Waste Streams from Pulp and Paper plants in Bioelectrochemical Systems

Electrospinning of Enzymatically Treated Cellulose

2012

Enzyme production by Trichoderma reesei Rut C-30 followed by enzymatic hydrolysis of different lignocellulosic materials

Robust Microorganisms and Process Strategies– The Key to Successful Lignocellulose Based Ethanol Production

High Gravity Fermentation: Great expectations, great challenges

Robust yeast for feasible lignocellulose based production

Enzymatic Transformation of Hemicelluloses to Bioplastics

A single-step competitive binding assay for mapping of single DNA molecules

Investigation of weak organic acid tolerance mechanisms by lipidomic profiling of Saccharomyces cerevisiae and Zygosaccaromyces bailii

Challenges of strain development and clone selection for bioethanol production from lignocellulose

High Gravity Fermantation:Process optimization with regard to physiological requirements of yeast

A novel process configuration of Simultaneous Saccharification and Fermentation for bioethanol production at high solid loadings

Screening Tropical Microorganisms for the Discovery of Enzymes for Biomass Modification and Degradation

Challenges in cellulolytic enzyme production by filamentous fungus Trichoderma reesei on cellulosic materials

New method for studying the adsorption of enzymes into mesoporous particles with QCM‐D

Transcriptional response and alterations in adenonucleotides and redox cofactors in S. cerevisiae upon treatment with HMF and furfural

Challenges in enzymatic hydrolysis and fermentation of pretreated Arundo donax revealed by a comparison between SHF and SSF

EVALUATION OF EVOLVED AND BARCODED XYLOSE FERMENTING STRAINS FOR BIOETHANOL PRODUCTION FROM LIGNOCELLULOSE

Effect of inhibitors present n lignocellulosic hydrolysates on evolved xylose fermenting Saccharomyces cerevisiae strains

Enzymatic Hydrolysis of Different Cellulosic and Lignocellulosic Materials: What are the Limiting Factors?

Enzymatic Surface Modification of Hemicellulose Films to Control Adhesion and Wettability

2012

Evolutionary engineering strategies to enhance tolerance of xylose utilizing recombinant yeast to inhibitors derived from spruce biomass

2012

How well do the substrates KISS the enzyme? Molecular docking program selection for feruloyl esterases

Synthesis of Molecules for Enzymatic and Analytical Studies

Simultaneous Saccharification and Fermentation with substrate, enzyme and yeast feed facilitate bioethanol production at high solids loadings

Nutrients supplementation enhances the process robustness under high gravity conditions

Development of industrial yeast strains for efficient xylose fermentation in lignocellulosic material

Synthesis of Model Compounds for Enzymatic and Analytical Studies

Enzymatic Hydrolysis of Lignin-Carbohydrate Bonds

The first Enzymatic Hydrolysis of Lignin-Carbohydrate Bonds

High Gravity Biofuels: Process amelioration methods as tools to deepen our knowledge on the toxicity og lignocellulosic hydrolysates

A novel process configuration of Simultaneous Saccharification and Fermentation for bioethanol production at high solid loadings

CHALLENGES AND POSSIBILITIES OF SECOND GENERATION BIOETHANOL PRODUCTION PROCESS AT HIGH SUBSTRATE

Evolutionary engineering of Saccharomyces cerevisiae for efficient aerobic xylose consumption

Evaluation of evolved xylose fermenting strains for bioethanol production – Comparison of single cells and mixed populations

2012

Common and Distant Structural Characteristics of Feruloyl Esterase Families from Aspergillus oryzae

Hemicelluloses Modifications: From Biopolymers to Bioplastics

Comparison of industrial xylose fermentation with yeast performed at different process scale

HMF and furfural stress results in drainage of redox and energy charge of Saccharomyces cerevisiae

Investigation of weak organic acid tolerance mechanisms by lipidomic profiling of Saccharomyces cerevisiae and Zygosaccaromyces bailii

Investigating the Yet-Unknown Biomass Degrading and Modifying Enzymes of Aspergillus oryzae

Comparative lipidomic profiling of Saccharomyces cerevisiae to reveal lipid composition changes in the plasma membrane upon exposure to lignocellulose inhibitors

Bioconversion of lignocellulosic hydrolysates: Strategies to overcome the inhibitory effects at High Gravity processes

Enzyme Discovery Platform

2012

The interplay between sulphur and selenium metabolism in yeast influences the intracellular redox balance

Lignin boosts the cellulase performance of a GH-61 enzyme from Sporotrichum thermophile

Investigating the Yet-Unknown Biomass Degrading and Modifying Enzymes of Aspergillus oryzae

2012

What is a biorefinery?

Enzymatic treatment of cellulose for electrospinning of nanofibers

The first Enzymatic Hydrolysis of Lignin-Carbohydrate Bonds

Fermentation of Biorefinery Streams

Investigating the yet-unknown biomass degrading and modifying enzymes of Aspergillus oryzae

Development and large scale performance of efficient xylose fermenting yeast strains

Enzymatic treatment of cellulose for electrospinning

Synthesis of LCC Model Compounds for Enzyme Discovery

Biogas production as a contributor to the biorefinery concept

Towards An Assay For Glucuronoyl Esterase On Natural Lignin-Carbohydrate Ester Bonds

Descriptor-based computational analysis and molecular simulation studies reveals a novel classification scheme and structure-function relationship elements for feruloyl esterases

Descriptor-based computational analysis reveals a novel classification scheme for feruloyl esterase enzyme families

Physiological studies of Saccharomyces cerevisiae for increased tolerance against furfural and HMF – two common inhibitors in lignocellulosic hydrolysate

2011

The impact of phosphate scarcity on pharmaceutical protein production in S. cerevisiae: linking transcriptomic insights to phenotypic responses

A natural substrate Glucuronic Acid Esterase assay

Immobilization of feruloyl esterases in mesoporous silica

Biotechnology for production of bioactive seleno compounds and study of their influence on mouse metabolome

The fermentation of hemicelluloses derived from the TMP – Ecohelix process

2011

Metabolic and Bioprocess Engineering for Production of selenized yeast with increased content of seleno-methylselenocysteine

The effect of accelerated hydrothermal aging on NH 3-SCR over Cu-Hbea catalyst

A natural substrate Glucuronic Acid Esterase assay

Yeast cells viability in industrial fermentation media determined by high-resolution growth curves

Developing a Glucuronoyl Esterase assay

Second generation bioethanol production process at high substrate concentration

Industrial verification of pentose fermenting yeast

Enzyme production and hydrolysis of lignocellulosic materials

2011

Revealing the beneficial effect of protease supplementation to high gravity beer fermentations using "-omics" techniques

Green Production of Materials from Plant Hemicelluloses

A novel process configuration of simultaneous saccharification and fermentation for bioethanol production at high solid loadings

Screening Natural Resources for Enzymes With Wood Degrading and Wood Modifying Properties

Feruloyl esterases for biosynthesis in mesoporous silica

Bioethanol production from lignocellulosic raw materials through high gravity fermentation

The effect of pretreatment harshness on separate hydrolysis and fermentation of giant reed by a xylose-consuming Saccharomyces cerevisiae strain

Immobilization of feruloyl esterases in mesoporous materials leads to improved transesterification yield

Isolation and identification of microorganisms from soil able to utilize lignin as single carbon source

Studying the ability of Fusarium oxysporum and recombinant Saccharomyces cerevisiae to efficiently cooperate in decomposition and ethanolic fermentation of wheat straw

Physiological studies of Saccharomyces cerevisiae for increased tolerance against furfural and HMF – two common inhibitors in lignocellulosic hydrolysate

2011

The interplay of descriptor-based computational analysis with pharmacophore modeling builds the basis for a novel classification scheme for feruloyl esterases

Yeast cells viability in industrial fermentation media determined by high-resolution growth curves

Immobilization of feruloyl esterases in mesoporous silica

FERMENTATION OF BIOREFINERY STREAMS

Simultaneous Saccharification and Fermentation Performance of S. cerevisiae strains on spruce and bagasse slurries

Adaption of the xylose fermenting yeast Saccharomyces cerevisiae F12 for improving ethanol production in different fed-batch SSF processes

Metabolism of selenium in Saccharomyces cerevisiae and improved biosynthesis of bioactive organic Se-compounds

Effects of selenium on Saccharomyces cerevisiae physiology: essential knowledge for the development of Se-enriched yeast cell factory

Physiological characterization of adapted S. cerevisiae strain in an anaerobic fermentation on spruce hydrolysate and in a SSF process on spruce slurry

2010

A comparative summary of expression systems for the recombinant production of galactose oxidase

On-line monitoring of fermentation processes in lignocellulose-to-bioalcohol production.

Characterization and kinetic analysis of a thermostable GH3 β-glucosidase from Penicillum brasilianum

Feruloyl esterases for biosynthesis in confined media

Sensor combination and chemometric variable selection for online monitoring of Streptomyces coelicolor fed-batch cultivations

Novel Enzymes for the degradation of Lignin-Carbohydrate complexes

Descriptor-based computational analysis reveals a new classification scheme for feruloyl esterase

2010

Combining Substrate Specificity Analysis with Support Vector Classifiers Reveals Feruloyl Esterase as a Phylogenetically Informative Protein Group

Feruloyl esterases as biosyntetic tools for the organic synthesis of nutraceutical compunds

Enzymatic wood hydrolysis – stealing technology from molds

Novel Enzymes for the degradation of Lignin-Carbohydrate complexes

Improvement by adaptive evolution of cellular properties of pentose-fermenting yeast for ethanol production from lignocellulosic material

The b-subunits of the Snf1 kinase in Saccharomyces cerevisae, Gal83 and Sip2, but not Sip1 are redundant in glucose derepression and regulation of sterol biosynthesis

Recombinant galactose oxidase production in fed batch fermentations with Pichia pastoris

A comparison between simultaneous saccharification and fermentation (SSF) and separate hydrolysis and fermentation (SHF) of spruce and giant reed using two Saccharomyces cerevisiae strains

Biosyntheis of Bioactive Seleno-Compunds in Saccharomyces cerevisiae via Metabolic and Bioprocess Engineering

Metabolism of selenium in Saccharomyces cerevisiae and improved biosynthesis of bioactive organic Se-compounds

LCC-degrading enzymes

Biosynthesis of bioactive seleno-metabolites in Saccharomyces cerevisiae

Physiological characterization of brewer’s yeast in high-gravity beer fermentations with glucose or maltose syrups as adjuncts

Overexpression of a novel endogenous NADH kinase in Aspergillus nidulans enhances growth

Biosynthesis of bioactive seleno-metabolites in Saccharomyces cerevisiae

Overexpression of isocitrate lyase-glyoxylate bypass influence on matabolism in Aspergillus niger

Studies of the Production of Fungal Polyketides in Aspergillus nidulans by Using Systems Biology Tools

Physiological characterisation of acuB deletion in Aspergillus niger

Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator

On-line estimation of biomass, glucose and ethanol in Saccharomyces cerevisiae cultivations using in-situ multi-wavelength fluorescence and software sensors

Brewin applications of metabolic engineering and other strategies for process improvement in beer production

Cloning of a GH5 endoglucanase from genus Penicillium and its binding to different lignins

Gene deletion of cytosolic ATP: citrate lyase leads to altered organic acid production in Aspergillus niger

Impact of overexpressing NADH kinase on glucose and xylose metabolism in recombinant xylose-utilizing Saccharomyces cerevisiae

Fungal Ferulic Acid Esterases – Specificity and Phylogeny

Hydrolysis of cellulose using mono-component enzymes shows synergy during hydrolysis of phosphoric acid swollen cellulose (PASC), but competition on Avicel

Deleting the para-nitrophenyl phosphatase (pNPPase), PHO13, in recombinant Saccharomyces cerevisiae improves growth and ethanol production on D-xylose

Identification of NADH kinase activity in filamentous fungi and structural modelling of the novel enzyme from Fusarium oxysporum

Physiological characterization of glucose repression in the strains with SNF1 and SNF4 genes deleted

Fermentation characteristics of Fusarium oxysporum grown on acetate

Adaptation of Saccharomyces cerevisiae expressing a heterologous protein

Metabolic footprinting in microbiology: methods and applications in functional genomics and biotechnology

2008

Systems Analysis Unfolds the Relationship between the Phosphoketolase Pathway and Growth in Aspergillus nidulans

Comparison of SHF and SSF Processes From Steam-Exploded Wheat Straw for Ethanol Production by Xylose-Fermenting and Robust Glucose-Fermenting Saccharomyces cerevisiae Strains

Characterization of Global Yeast Quantitative Proteome Data Generated from the Wild-Type and Glucose Repression Saccharomyces cerevisiae Strains: The comparison of two Quantitative Methods

Identification of biomarkers for genotyping Aspergilli using non-linear methods for clustering and classification

The Roles of Galactitol, Galactose-1-Phosphate, and Phosphoglucomutase in Galactose-Induced Toxicity in Saccharomyces cerevisiae

Bioethanol production from lignocellulosic material