Jens B Nielsen
Jens Nielsen är professor på avdelningen för systembiologi och leder en forskargrupp på över 60 personer. Jens Nielsen har hittills publicerat mer än 700 forskningsartiklar som har citerats över 65 000 gånger (H-faktor 118). Han är delförfattare till mer än 40 böcker, däribland två mycket använda läroböcker, samt står bakom mer än 50 patent. Jens Nielsen har grundat flera företag som tillsammans dragit in mer än 25 miljoner euro i riskkapital. Han har erhållit en mängd utmärkelser och är medlem i flera akademier, däribland National Academy of Engineering i USA, Royal Danish Academy of Science and Letters, Kungliga Vetenskapsakademien och Kungl. Ingenjörvetenskapsakademien.
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Visar 692 publikationer
Brain energy metabolism is optimized to minimize the cost of enzyme synthesis and transport
Increased CO
Transcriptomic meta-analysis to identify potential antifungal targets in Candida albicans
Single-cell omics analysis with genome-scale metabolic modeling
The transition from 2G to 3G-feedstocks enabled efficient production of fuels and chemicals
Metabolic engineering of human gut microbiome: Recent developments and future perspectives
Modeling the metabolic dynamics at the genome-scale by optimized yield analysis
Fine-tuning of p-coumaric acid synthesis to increase (2S)-naringenin production in yeast
Flux regulation through glycolysis and respiration is balanced by inositol pyrophosphates in yeast
Engineering yeast to produce plant-derived anti-obesity agent
Engineering yeast mitochondrial metabolism for 3-hydroxypropionate production
Harnessing synthetic biology for mushroom farming
The acute effect of different NAD+ precursors included in the combined metabolic activators
GotEnzymes: an extensive database of enzyme parameter predictions
Engineering yeast for high-level production of diterpenoid sclareol
Analysis of normal levels of free glycosaminoglycans in urine and plasma in adults
Multiomics Analysis Reveals the Impact of Microbiota on Host Metabolism in Hepatic Steatosis
Metabolic reconfiguration enables synthetic reductive metabolism in yeast
Noninvasive detection of any-stage cancer using free glycosaminoglycans
Genome-scale modeling of yeast metabolism: retrospectives and perspectives
Deep learning-based k(cat) prediction enables improved enzyme-constrained model reconstruction
Discovery of therapeutic agents targeting PKLR for NAFLD using drug repositioning
Multiscale models quantifying yeast physiology: towards a whole-cell model
Machine learning for data integration in human gut microbiome
Microbiome and metabolome features of the cardiometabolic disease spectrum
Microbiome-derived ethanol in nonalcoholic fatty liver disease
Controlling gene expression with deep generative design of regulatory DNA
Integrative functional analysis uncovers metabolic differences between Candida species
A Pan-Draft Metabolic Model Reflects Evolutionary Diversity across 332 Yeast Species
A systems biology approach to study non-alcoholic fatty liver (NAFL) in women with obesity
Professor Stefan Hohmann (08.09.1956-02.07.2021)
Cellular limitation of enzymatic capacity explains glutamine addiction in cancers
Yeast has evolved to minimize protein resource cost for synthesizing amino acids
Bioactive metabolites: The double-edged sword in your food
Learning deep representations of enzyme thermal adaptation
Innovation trends in industrial biotechnology
Microbial production of chemicals driven by CRISPR-Cas systems
Yeast synthetic biology advances biofuel production
Metabolic network remodelling enhances yeast’s fitness on xylose using aerobic glycolysis
Systems biology based drug repositioning for development of cancer therapy
Transcriptomic response of Saccharomyces cerevisiae to octanoic acid production
Engineering yeast metabolism for the discovery and production of polyamines and polyamine analogues
Discovery of Functional Alternatively Spliced PKM Transcripts in Human Cancers
Metabolic Engineering: Concepts and Applications: Volume 13a and 13b
Proteome Constraints in Genome-Scale Models
Machine learning-based investigation of the cancer protein secretory pathway
Production of β-carotene in Saccharomyces cerevisiae through altering yeast lipid metabolism
Adaptations in metabolism and protein translation give rise to the Crabtree effect in yeast
Synthetic biology advanced natural product discovery
Metabolic Engineering of Yeast
In vitro turnover numbers do not reflect in vivo activities of yeast enzymes
Combined Metabolic Activators Accelerates Recovery in Mild-to-Moderate COVID-19
Performance of Regression Models as a Function of Experiment Noise
Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community
Draft genome sequences of five fungal strains isolated from Kefir
Rational gRNA design based on transcription factor binding data
Mathematical modeling of proteome constraints within metabolism
Stratification of patients with clear cell renal cell carcinoma to facilitate drug repositioning
The Translational Status of Cancer Liquid Biopsies
Yeast optimizes metal utilization based on metabolic network and enzyme kinetics
De novo biosynthesis of bioactive isoflavonoids by engineered yeast cell factories
Expression of fungal biosynthetic gene clusters in S. cerevisiae for natural product discovery
Strategies and challenges with the microbial conversion of methanol to high-value chemicals
Fatty acid synthesis is required for breast cancer brain metastasis
INetModels 2.0: An interactive visualization and database of multi-omics data
Bayesian genome scale modelling identifies thermal determinants of yeast metabolism
The yeastGemMap: A process diagram to assist yeast systems-metabolic studies
Addressing the heterogeneity in liver diseases using biological networks
Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments
Combinatorial, additive and dose-dependent drug–microbiome associations
Yeast based biorefineries for oleochemical production
Yeast metabolic innovations emerged via expanded metabolic network and gene positive selection
A single chromosome strain of S. cerevisiae exhibits diminished ethanol metabolism and tolerance
Production of 10-methyl branched fatty acids in yeast
Genome-scale insights into the metabolic versatility of Limosilactobacillus reuteri
Current Status of COVID-19 Therapies and Drug Repositioning Applications
Stress-induced expression is enriched for evolutionarily young genes in diverse budding yeasts
Metabolic Engineering of Saccharomyces cerevisiae for Rosmarinic Acid Production
Bioprospecting Through Cloning of Whole Natural Product Biosynthetic Gene Clusters
Rewiring carbon flux in Escherichia coli using a bifunctional molecular switch
Evolution from adherent to suspension: systems biology of HEK293 cell line development
Advances in Metabolic Engineering of Saccharomyces cerevisiae for Cocoa Butter Equivalent Production
Editorial: yeast synthetic biology
Pathway engineering in yeast for synthesizing the complex polyketide bikaverin
Applications of Genome-Wide Screening and Systems Biology Approaches in Drug Repositioning
MEMOTE for standardized genome-scale metabolic model testing
DSAVE: Detection of misclassified cells in single-cell RNA-Seq data
Engineering yeast phospholipid metabolism for de novo oleoylethanolamide production
Nitrogen limitation reveals large reserves in metabolic and translational capacities of yeast
Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
Yeast systems biology in understanding principles of physiology underlying complex human diseases
Comprehensive understanding of Saccharomyces cerevisiae phenotypes with whole-cell model WM_S288C
The role of peroxisomes in xylose alcoholic fermentation in the engineered Saccharomyces cerevisiae
Improvement in the Current Therapies for Hepatocellular Carcinoma Using a Systems Medicine Approach
Classification of clear cell renal cell carcinoma based on PKM alternative splicing
Building blocks are synthesized on demand during the yeast cell cycle
Sources of variation in cell-type RNA-Seq profiles
Third-generation biorefineries as the means to produce fuels and chemicals from CO2
Pan-cancer analysis of the metabolic reaction network
A systems biology approach for studying neurodegenerative diseases
Current state of aromatics production using yeast: achievements and challenges
Dysregulated autophagy in muscle precursor cells from humans with type 2 diabetes
Saccharomyces cerevisiae displays a stable transcription start site landscape in multiple conditions
Machine Learning Applied to Predicting Microorganism Growth Temperatures and Enzyme Catalytic Optima
The pan-genome of Saccharomyces cerevisiae
Systems biology perspective for studying the gut microbiota in human physiology and liver diseases
Assembly and analysis of the genome sequence of the yeast Brettanomyces naardenensis CBS 7540
A bioinformatic pipeline to analyze ChIP-exo datasets
Tackling Cancer with Yeast-Based Technologies
Recent trends in metabolic engineering of microbial chemical factories
Metagenomic analysis of bile salt biotransformation in the human gut microbiome
Reconstruction and analysis of a Kluyveromyces marxianus genome-scale metabolic model
Big data in yeast systems biology
Antibiotic Lethality Is Impacted by Nutrient Availabilities: New Insights from Machine Learning
Modelling approaches for studying the microbiome
Yeast Systems Biology: Model Organism and Cell Factory
Adaptive laboratory evolution of tolerance to dicarboxylic acids in Saccharomyces cerevisiae
Model-Assisted Fine-Tuning of Central Carbon Metabolism in Yeast through dCas9-Based Regulation
Cell factory engineering for improved production of natural products
Energy metabolism controls phenotypes by protein efficiency and allocation
Complex I is bypassed during high intensity exercise
Expanding the Dynamic Range of a Transcription Factor-Based Biosensor in Saccharomyces cerevisiae
Genome-scale model of Rhodotorula toruloides metabolism
Rewiring carbon metabolism in yeast for high level production of aromatic chemicals
METABOLISM: A stress-coping strategy for yeast cells
Metagenomic analysis of microbe-mediated vitamin metabolism in the human gut microbiome
Proteome analysis of xylose metabolism in Rhodotorula toruloides during lipid production
Regulation of yeast-to-hyphae transition in Yarrowia lipolytica
Global rewiring of cellular metabolism renders Saccharomyces cerevisiae Crabtree negative
Screening of 2A peptides for polycistronic gene expression in yeast
High-throughput microfluidics for the screening of yeast libraries
Reprogramming Yeast Metabolism from Alcoholic Fermentation to Lipogenesis
TCSBN: A database of tissue and cancer specific biological networks
Coupling cell division to metabolic pathways through transcription
Systems biology in hepatology: Approaches and applications
Guidelines and recommendations on yeast cell death nomenclature
Heterologous transporter expression for improved fatty alcohol secretion in yeast
Impact of forced fatty acid synthesis on metabolism and physiology of Saccharomyces cerevisiae
Metabolic engineering of Saccharomyces cerevisiae for production of fatty acid–derived hydrocarbons
Balanced trafficking between the ER and the Golgi apparatus increases protein secretion in yeast
Metabolite secretion in microorganisms: the theory of metabolic overflow put to the test
Expression of cocoa genes in Saccharomyces cerevisiae improves cocoa butter production
Targeting CDK2 overcomes melanoma resistance against BRAF and Hsp90 inhibitors
In vitro co-cultures of human gut bacterial species as predicted from co-occurrence network analysis
Challenges in modeling the human gut microbiome
Investigation of putative regulatory acetylation sites in Fas2p of Saccharomyces cerevisiae
Barriers and opportunities in bio-based production of hydrocarbons
Metabolic engineering of Saccharomyces cerevisiae for overproduction of triacylglycerols
Evolution of the Metabolic Engineering Community
Advancing biotechnology with CRISPR/Cas9: recent applications and patent landscape
Redirection of lipid flux toward phospholipids in yeast increases fatty acid turnover and secretion
Drug Repositioning for Effective Prostate Cancer Treatment
Multiplexed CRISPR/Cas9 Genome Editing and Gene Regulation Using Csy4 in Saccharomyces cerevisiae
Dynamic engineering of 1-alkenes biosynthesis and secretion in yeast.
Metabolite Depletion Affects Flux Profiling of Cell Lines
Changes in lipid metabolism convey acid tolerance in Saccharomyces cerevisiae
Efficient protein production by yeast requires global tuning of metabolism
METABOLISM: Built on stable catalysts
Comparison of the metabolic response to over-production of p-coumaric acid in two yeast strains
Predicting growth of the healthy infant using a genome scale metabolic model.
Metabolic Models of Protein Allocation Call for the Kinetome
Moderate Expression of SEC16 Increases Protein Secretion by Saccharomyces cerevisiae
Genome-scale metabolic models applied to human health and disease
The yeast osmostress response is carbon source dependent
Biobased production of alkanes and alkenes through metabolic engineering of microorganisms
Systematic inference of functional phosphorylation events in yeast metabolism
Editorial: Where is scientific publishing heading?
Affibody Scaffolds Improve Sesquiterpene Production in Saccharomyces cerevisiae.
Anticancer drug discovery through genome-scale metabolic modeling
Improving the economics of NASH/NAFLD treatment through the use of systems biology
Exploring the potential of Saccharomyces cerevisiae for biopharmaceutical protein production
Engineering central metabolism – a grand challenge for plant biologists
Exploiting off-targeting in guide-RNAs for CRISPR systems for simultaneous editing of multiple genes
Systems Biology of Metabolism: A Driver for Developing Personalized and Precision Medicine
Enabling the synthesis of medium chain alkanes and 1-alkenes in yeast
Metabolic engineering frontiers emerging with advanced tools and methodologies
Type 2 diabetes and obesity induce similar transcriptional reprogramming in human myocytes
Engineering Robustness of Microbial Cell Factories
Selection of complementary foods based on optimal nutritional values
Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica
Expanding the product portfolio of fungal type I fatty acid synthases
Physiological characterization of secondary metabolite producing Penicillium cell factories
Establishing very long-chain fatty alcohol and wax ester biosynthesis in Saccharomyces cerevisiae
Genome scale metabolic modeling of cancer
New challenges to study heterogeneity in cancer redox metabolism
Transcriptional reprogramming in yeast using dCas9 and combinatorial gRNA strategies
The Impact of Systems Biology on Bioprocessing
Metabolic engineering of yeast for fermentative production of flavonoids
Network analyses identify liver-specific targets for treating liver diseases
A molecular genetic toolbox for Yarrowia lipolytica
Regulation of amino-acid metabolism controls flux to lipid accumulation in yarrowia lipolytica
Engineering yeast metabolism for production of fuels and chemicals
Editorial: The Impact of Systems Medicine on Human Health and Disease
Thermotolerant yeasts selected by adaptive evolution express heat stress response at 30 degrees C
Industrial systems biology and its impact on synthetic biology of yeast cell factories
Dysregulated signaling hubs of liver lipid metabolism reveal hepatocellular carcinoma pathogenesis
Engineering yeast for high-level production of stilbenoid antioxidants
Flux control through protein phosphorylation in yeast
Engineering Cellular Metabolism
Human gut microbiota and healthy aging: Recent developments and future prospective
Prognostic Value of Plasma and Urine glycosaminoglycan scores in clear cell renal cell carcinoma
Adaptive Evolution of Phosphorus Metabolism in Prochlorococcus.
Transcriptomics resources of human tissues and organs
Systematic analysis of overall survival and interactions between tumor mutations and drug treatment
Engineering of synthetic, stress-responsive yeast promoters
In search for symmetries in the metabolism of cancer
Metabolic Trade-offs in Yeast are Caused by F1F0-ATP synthase
Integrative analysis of human omics data using biomolecular networks
Functional expression and evaluation of heterologous phosphoketolases in Saccharomyces cerevisiae
Heme metabolism in stress regulation and protein production: From Cinderella to a key player.
sTrehalose-6-phosphate synthase and stabilization of yeast glycolysis
Adaptation to different types of stress converge on mitochondrial metabolism
Production of fatty acid-derived oleochemicals and biofuels by synthetic yeast cell factories
Biobased organic acids production by metabolically engineered microorganisms
Microbial acetyl-CoA metabolism and metabolic engineering
Yeast cell factories on the horizon: Metabolic engineering in yeast gets increasingly more versatile
Long-chain Alkane Production by the Yeast Saccharomyces cerevisiae
HCSD: The human cancer secretome database
Networking in metabolism and human disease
Micro-droplet based directed evolution outperforms conventional laboratory evolution
Enhanced amino acid utilization sustains growth of cells lacking Snf1/AMPK
Stratification of Hepatocellular Carcinoma Patients Based on Acetate Utilization
Genome scale models of yeast: towards standardized evaluation and consistent omic integration
Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
How to set up collaborations between academia and industrial biotech companies
New insight into the gut microbiome through metagenomics
Logical transformation of genome-scale metabolic models for gene level applications and analysis
Tissue-based map of the human proteome
Metabolic engineering strategies for microbial synthesis of oleochemicals
Applications of computational modeling in metabolic engineering of yeast
Identifying anti-growth factors for human cancer cell lines through genome-scale metabolic modeling
Modifying yeast tolerance to inhibitory conditions of ethanol production processes
Genetic and nutrient modulation of acetyl-CoA levels in Synechocystis for n-butanol production
Production of natural products through metabolic engineering of Saccharomyces cerevisiae
Advancing metabolic engineering through systems biology of industrial microorganisms
RNA-seq analysis of Pichia anomala reveals important mechanisms required for survival at low pH
Finding directionality and gene-disease predictions in disease associations
New paradigms for metabolic modeling of human cells
From next-generation sequencing to systematic modeling of the gut microbiome
Minimum Information about a Biosynthetic Gene cluster
Glucose repression in Saccharomyces cerevisiae
Modular pathway rewiring of Saccharomyces cerevisiae enables high-level production of L-ornithine
De novo production of resveratrol from glucose or ethanol by engineered Saccharomyces cerevisiae
FEMS yeast research: the yeast community journal
Flux balance analysis predicts essential genes in clear cell renal cell carcinoma metabolism
Impact of synthetic biology and metabolic engineering on industrial production of fine chemicals
Human metabolic atlas: an online resource for human metabolism
Cancer Metabolism: A Modeling Perspective
Enabling Technologies to Advance Microbial Isoprenoid Production
Molecular Mechanism of Flocculation Self-Recognition in Yeast and Its Role in Mating and Survival
ANT: Software for Generating and Evaluating Degenerate Codons for Natural and Expanded Genetic Codes
Unlocking the potential of fungi: the QuantFung project
The gut microbiota modulates host amino acid and glutathione metabolism in mice
Do genome-scale models need exact solvers or clearer standards?
Defining the human gallbladder proteome by transcriptomics and affinity proteomics
Most influential FEMS publications
Genome Scale Metabolic Modeling of the Riboflavin Overproducer Ashbya gossypii
High-throughput screening for industrial enzyme production hosts by droplet microfluidics
Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance
Maintaining a strong yeast research community
Bridging the gaps in systems biology
Altered sterol composition renders yeast thermotolerant
Genome-Scale Metabolic Models: A Link between Bioinformatics and Systems Biology
A dedicated database system for handling multi-level data in systems biology
Kiwi: a tool for integration and visualization of network topology and gene-set analysis
Synthetic Biology for Engineering Acetyl Coenzyme A Metabolism in Yeast
Management of the endoplasmic reticulum stress by activation of the heat shock response in yeast
The human liver-specific proteome defined by transcriptomics and antibody-based profiling
Physiological characterization of the high malic acid-producing Aspergillus oryzae strain 2103a-68
Development of a yeast cell factory for production of aromatic products
Defining the Human Adipose Tissue Proteome To Reveal Metabolic Alterations in Obesity
BioMet Toolbox 2.0: genome-wide analysis of metabolism and omics data
Systems biology: Developments and applications
Impact of protein uptake and degradation on recombinant protein secretion in yeast
Kinetic models in industrial biotechnology - Improving cell factory performance
The use of Genome-scale metabolic models for drug target and biomarker identification
Engineering synergy in biotechnology
Advances in metabolic engineering of yeast Saccharomyces cerevisiae for production of chemicals
Genome-scale analysis of the high-efficient protein secretion system of Aspergillus oryzae
Assessing the human gut microbiota in metabolic diseases.
Application of genome-scale metabolic models in metabolic engineering
The role of biofuels in the future energy supply
Genome-scale modeling of human metabolism - a systems biology approach.
Yeast as a platform cell factory in future biorefineries
Genome-Scale Modeling of the Protein Secretory Machinery in Yeast
Investigation of Malic Acid Production in Aspergillus oryzae under Nitrogen Starvation Conditions
Rapid Quantification of Yeast Lipid using Microwave-Assisted Total Lipid Extraction and HPLC-CAD
Understanding the interactions between bacteria in the human gut through metabolic modeling
Correlation of cell growth and heterologous protein production by Saccharomyces cerevisiae
Economic and environmental impacts of microbial biodiesel
Novel insights into obesity and diabetes through genome-scale metabolic modeling
Gut metagenome in European women with normal, impaired and diabetic glucose control
Metabolic engineering of yeast for production of fuels and chemicals
FANTOM: Functional and taxonomic analysis of metagenomes
Mapping condition-dependent regulation of metabolism in yeast through genome-scale modeling
Quantitative Analysis of Glycerol Accumulation, Glycolysis and Growth under Hyper Osmotic Stress
Production of biopharmaceutical proteins by yeast Advances through metabolic engineering
A community-driven global reconstruction of human metabolism
Mapping Condition-Dependent Regulation of Lipid Metabolism in Saccharomyces cerevisiae
Using Transcriptomics To Improve Butanol Tolerance of Synechocystis sp Strain PCC 6803
Heat shock response improves heterologous protein secretion in Saccharomyces cerevisiae
Adaptively evolved yeast mutants on galactose show trade-offs in carbon utilization on glucose
Droplet based directed evolution of yeast cell factories doubles production of industrial enzymes
Industrial Systems Biology of Saccharomyces cerevisiae Enables Novel Succinic Acid Cell Factory
Establishing a platform cell factory through engineering of yeast acetyl-CoA metabolism
Integration of clinical data with a genome-scale metabolic model of the human adipocyte
Advanced biofuel production by the yeast Saccharomyces cerevisiae
Symptomatic atherosclerosis is associated with an altered gut metagenome
Different expression systems for production of recombinant proteins in Saccharomyces cerevisiae
Fifteen years of large scale metabolic modeling of yeast: Developments and impacts
Profiling of Cytosolic and Peroxisomal Acetyl-CoA Metabolism in Saccharomyces cerevisiae
Genome-scale metabolic representation of Amycolatopsis balhimycina
Lipid biosynthesis monitored at the single-cell level in Saccharomyces cerevisiae
Applied systems biology - vanillin production in Saccharomyces cerevisiae
Reconstruction and Evaluation of the Synthetic Bacterial MEP Pathway in Saccharomyces cerevisiae
Systems medicine and metabolic modelling
Evolutionary engineering of Saccharomyces cerevisiae for efficient aerobic xylose consumption
Industrial glucoamylase fed-batch benefits from oxygen limitation and high osmolarity
Aspergilli: Systems biology and industrial applications
Translational and systems medicine Introduction
A systems-level approach for metabolic engineering of yeast cell factories
Metabolic engineering, synthetic biology and systems biology
Recovery of phenotypes obtained by adaptive evolution through inverse metabolic engineering
Metabolic engineering of recombinant protein secretion by Saccharomyces cerevisiae
Bridging omics technologies with synthetic biology in yeast industrial biotechnology
Systems biology: the 'new biotechnology' Editorial overview
Mapping the polysaccharide degradation potential of Aspergillus niger
Genome-scale metabolic models of Saccharomyces cerevisiae
The Influence of Microgravity on Invasive Growth in Saccharomyces cerevisiae
Prospects for microbial biodiesel production
Synergies between synthetic biology and metabolic engineering
Fermentation kinetics: Central and modern concepts
BIOFUELS Chimeric synthetic pathways
Molecular and process design for rotavirus-like particle production in Saccharomyces cerevisiae
Codon usage variability determines the correlation between proteome and transcriptome fold changes
MEMOSys: Bioinformatics platform for genome-scale metabolic models
Molecular Basis for Mycophenolic Acid Biosynthesis in Penicillium brevicompactum
Prospects for systems biology and modeling of the gut microbiome
Opportunities for yeast metabolic engineering: Lessons from synthetic biology
Mathematical models of cell factories: moving towards the core of industrial biotechnology
Mapping the interaction of Snf1 with TORC1 in Saccharomyces cerevisiae
Transcriptional control of metabolic fluxes
Identification of flux control in metabolic networks using non-equilibrium thermodynamics
BioMet Toolbox: genome-wide analysis of metabolism
Systems Biology of lipid metabolism: From yeast to human
Systems biology of microorganisms
OptFlux: an open-source software platform for in silico metabolic engineering
Transcriptional progression of atrophic gastritis development in humans
Use of genome-scale metabolic models for understanding microbial physiology
Analysis of Genome-Wide Coexpression and Coevolution of Aspergillus oryzae and Aspergillus niger
Systems Biology of Industrial Microorganisms
Measuring enzyme activities under standardized in-vivo like conditions for systems biology
Systems biology of energy homeostasis in yeast
Toward Design-based Engineering of Industrial Microbes
In-depth analysis of Aspergillus niger metabolism during industrial fed-batch fermentations
Systemic analysis of the response of Aspergillus niger to ambient pH
The 2008 update of the Aspergillus nidulans genome annotation: A community effort
Random sampling of metabolic networks
Systems biology of lipid metabolism: From yeast to human
Structure and flux analysis of metabolic networks
Overexpression of isocitrate lyase-glyoxylate bypass influence on matabolism in Aspergillus niger
Yeast as a Prototype for Systems Biology
Genome-wide analysis of maltose utilization and regulation in aspergilli
Physiological characterisation of acuB deletion in Aspergillus niger
Developing appropriate hosts for metabolic engineering (Section V. - Introduction)
Global transcriptional response of Saccharomyces cerevisiae to the deletion of SDH3
Nutritional Systems Biology: Definitions and Approaches
Qualification of flux control in metabolic pathways
Current status of systems biology in Aspergilli
Heterologous production of non-ribosomal peptide LLD-ACV in Saccharomyces cerevisiae
Metabolic engineering of streptomyces
Recombinant bacterial hemoglobin alters metabolism of Aspergillus niger
A trispecies Aspergillus microarray: Comparative transcriptomics of three Aspergillus species
Reconstruction of a bacterial isoprenoid biosynthetic pathway in Saccharomyces cerevisiae
Systems biology: Is the hope worth the hype
Can yeast systems biology contribute to the understanding of human disease?
Analysis of Aspergillus nidulans metabolism at the genome-scale
Production of the polyketide 6-MSA in yeast engineered for increased malonyl-CoA supply
Penicillium chrysogenum is involved in regulation of b-lactam production
Natural computation meta-heuristics for the in silico optimization of microbial strains
Physiological characterization of glucose repression in the strains with SNF1 and SNF4 genes deleted
Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae
Metabolomics. Topics in Current Genetics
Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus Niger
Antibiotic overproduction in Streptomyces coelicolor A3(2) mediated by phosphofructokinase deletion
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Visar 33 forskningsprojekt
Production of Benzylisoquinoline Alkaloids in Yeast
Yeast cell factories for advanced biofuels and microbial robustness
Engineering a robust biocatalyst for sustainable biofuel production
Mätning av glykosaminoglykaner till cancerdiagnostik
Systembiologi av eukaryal proteinsekretion
Biobaserad produktion av diesel och jetbränsle
Syntetisk biologi för biosyntes och produktion av naturliga produkter
Predictive and Accelerated Metabolic Engineering Network (PAcMEN)
Gut microbiome effects on cardiometabolic disease through metabolism-modifying metabolites (Gut-MMM)
Bioinformatics Services for Data-Driven Design of Cell Factories and Communities (DD-DeCaF)
Mapping the Transcription Factor Network of Yeast
Transkriptionsreglering i jäst på genomnivå
Mathematical modelling of tissue metabolism in response to malnutrition, II
Bioteknisk produktion av värdeskapande ingredienser
Mathematical modeling of tissue metabolism in response to malnutrition
Quantitative Biology for Fungal Secondary Metabolite Producers (QUANTFUNG)
Biobaserad produktion av diesel och jetbränsle
Engineering the Secretory Pathway for Recombinant Protein Secretion in Saccharomyces cerevisiae
Metagenomics in Cardiometabolic Diseases (METACARDIS)
Optimizing oil production in oleaginous yeast by cell-wide measurements and genome-based models
Infrastructure for Systems Biology - Europe (ISBE)
Biomarkers For Enhanced Vaccine Safety (BioVacSafe)
Industrial Systems Biology of Yeast and A. oryzae (INSYSBIO)